Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACFIOQ_RS04710 Genome accession   NZ_CP170404
Coordinates   900429..901169 (+) Length   246 a.a.
NCBI ID   WP_000216874.1    Uniprot ID   -
Organism   Staphylococcus aureus strain t7960     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 895429..906169
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFIOQ_RS04685 yhaM 895847..896788 (+) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -
  ACFIOQ_RS04690 - 896909..897871 (-) 963 WP_000782118.1 foldase protein PrsA -
  ACFIOQ_RS04695 - 898076..898633 (-) 558 WP_000477959.1 DUF3267 domain-containing protein -
  ACFIOQ_RS04700 - 899366..899731 (-) 366 WP_000648118.1 YtxH domain-containing protein -
  ACFIOQ_RS04705 - 899873..900295 (-) 423 WP_000004981.1 HIT family protein -
  ACFIOQ_RS04710 pptA 900429..901169 (+) 741 WP_000216874.1 ABC transporter ATP-binding protein EcsA Regulator
  ACFIOQ_RS04715 ecsB 901162..902385 (+) 1224 WP_001245758.1 ABC transporter permease EcsB -
  ACFIOQ_RS04720 - 902593..903912 (-) 1320 WP_001807150.1 ISL3-like element IS1181 family transposase -
  ACFIOQ_RS04725 traP 904002..904532 (-) 531 WP_047213579.1 signal transduction protein TRAP -
  ACFIOQ_RS04730 - 904718..904804 (+) 87 WP_031875110.1 hypothetical protein -
  ACFIOQ_RS04735 hemE 904794..905831 (+) 1038 WP_000233535.1 uroporphyrinogen decarboxylase -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.02 Da        Isoelectric Point: 4.6672

>NTDB_id=943243 ACFIOQ_RS04710 WP_000216874.1 900429..901169(+) (pptA) [Staphylococcus aureus strain t7960]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=943243 ACFIOQ_RS04710 WP_000216874.1 900429..901169(+) (pptA) [Staphylococcus aureus strain t7960]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATCGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGTCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAATGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACGTTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545