Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ACFIOQ_RS04375 Genome accession   NZ_CP170404
Coordinates   852404..853222 (+) Length   272 a.a.
NCBI ID   WP_001124428.1    Uniprot ID   -
Organism   Staphylococcus aureus strain t7960     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 847404..858222
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFIOQ_RS04350 - 848023..848553 (+) 531 WP_000184381.1 acyl-CoA thioesterase -
  ACFIOQ_RS04355 yfkAB 848813..849964 (-) 1152 WP_001089604.1 radical SAM/CxCxxxxC motif protein YfkAB -
  ACFIOQ_RS04360 - 850188..850349 (+) 162 WP_001005407.1 SE1561 family protein -
  ACFIOQ_RS04365 - 850479..850994 (+) 516 WP_000163287.1 type 1 glutamine amidotransferase domain-containing protein -
  ACFIOQ_RS04370 sgtB 851334..852143 (+) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  ACFIOQ_RS04375 recX 852404..853222 (+) 819 WP_001124428.1 recombination regulator RecX Regulator
  ACFIOQ_RS04380 - 853200..853514 (+) 315 WP_000435806.1 YfhH family protein -
  ACFIOQ_RS04385 - 853529..855046 (+) 1518 WP_042908027.1 ABC transporter ATP-binding protein -
  ACFIOQ_RS04390 - 855055..855891 (+) 837 WP_000886457.1 membrane protein -
  ACFIOQ_RS04395 - 856152..857129 (-) 978 WP_217660598.1 metal-dependent hydrolase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32285.13 Da        Isoelectric Point: 5.6338

>NTDB_id=943240 ACFIOQ_RS04375 WP_001124428.1 852404..853222(+) (recX) [Staphylococcus aureus strain t7960]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDYYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=943240 ACFIOQ_RS04375 WP_001124428.1 852404..853222(+) (recX) [Staphylococcus aureus strain t7960]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGATGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGATATGGCAGAGATTC
AAAAGTATGATTATTATCGCATAGGTTTAAATAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAAAGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.265

100

0.993