Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ACFIOB_RS09095 Genome accession   NZ_CP170401
Coordinates   1873211..1874029 (-) Length   272 a.a.
NCBI ID   WP_001124427.1    Uniprot ID   -
Organism   Staphylococcus aureus strain t10543     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1868211..1879029
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFIOB_RS09075 - 1869304..1870281 (+) 978 WP_000379095.1 metal-dependent hydrolase -
  ACFIOB_RS09080 - 1870542..1871378 (-) 837 WP_000886472.1 hypothetical protein -
  ACFIOB_RS09085 - 1871387..1872904 (-) 1518 WP_000535840.1 ABC transporter ATP-binding protein -
  ACFIOB_RS09090 - 1872919..1873233 (-) 315 WP_054194644.1 YfhH family protein -
  ACFIOB_RS09095 recX 1873211..1874029 (-) 819 WP_001124427.1 recombination regulator RecX Regulator
  ACFIOB_RS09100 sgtB 1874290..1875099 (-) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  ACFIOB_RS09105 - 1875441..1875956 (-) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  ACFIOB_RS09110 - 1876090..1876251 (-) 162 WP_001005407.1 SE1561 family protein -
  ACFIOB_RS09115 - 1876598..1876678 (+) 81 WP_100250272.1 hypothetical protein -
  ACFIOB_RS09120 - 1876779..1877420 (-) 642 WP_410539905.1 hypothetical protein -
  ACFIOB_RS09125 - 1877435..1878097 (-) 663 WP_000385047.1 hypothetical protein -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32259.10 Da        Isoelectric Point: 5.9211

>NTDB_id=943207 ACFIOB_RS09095 WP_001124427.1 1873211..1874029(-) (recX) [Staphylococcus aureus strain t10543]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
LQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=943207 ACFIOB_RS09095 WP_001124427.1 1873211..1874029(-) (recX) [Staphylococcus aureus strain t10543]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAATAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
TTACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCAGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAGGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAAAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.265

100

0.993