Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   ACFIOB_RS01585 Genome accession   NZ_CP170401
Coordinates   361315..362160 (+) Length   281 a.a.
NCBI ID   WP_001621659.1    Uniprot ID   -
Organism   Staphylococcus aureus strain t10543     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 356315..367160
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFIOB_RS01570 - 356583..358424 (-) 1842 WP_000077313.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -
  ACFIOB_RS01575 metC 358393..359553 (-) 1161 WP_000175862.1 cystathionine beta-lyase MetC -
  ACFIOB_RS01580 - 359550..360653 (-) 1104 WP_000655697.1 PLP-dependent transferase -
  ACFIOB_RS01585 spo0J 361315..362160 (+) 846 WP_001621659.1 ParB/RepB/Spo0J family partition protein Regulator
  ACFIOB_RS01590 - 362314..363195 (+) 882 WP_000373079.1 mechanosensitive ion channel family protein -
  ACFIOB_RS01595 - 363225..363428 (+) 204 WP_000157348.1 DUF951 domain-containing protein -
  ACFIOB_RS01600 ychF 363440..364537 (+) 1098 WP_001218729.1 redox-regulated ATPase YchF -
  ACFIOB_RS01605 - 364623..364814 (-) 192 WP_001052483.1 hypothetical protein -
  ACFIOB_RS01610 rpsF 365058..365354 (+) 297 WP_001261460.1 30S ribosomal protein S6 -
  ACFIOB_RS01615 ssbA 365375..365878 (+) 504 WP_000934799.1 single-stranded DNA-binding protein Machinery gene
  ACFIOB_RS01620 rpsR 365930..366172 (+) 243 WP_000897044.1 30S ribosomal protein S18 -

Sequence

Protein


Download         Length: 281 a.a.        Molecular weight: 32797.82 Da        Isoelectric Point: 10.0000

>NTDB_id=943140 ACFIOB_RS01585 WP_001621659.1 361315..362160(+) (spo0J) [Staphylococcus aureus strain t10543]
MSELSKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGAKVDISIKKSVGKISFEFESQDDFVRIIEQLNRKYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=943140 ACFIOB_RS01585 WP_001621659.1 361315..362160(+) (spo0J) [Staphylococcus aureus strain t10543]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGCAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGTATTTTGCAACCAATTGTGCTTAGAAAAACAGTTCAAGGTTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAGCGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTACCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTTAGATATTTAGAAAACCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGACAAAGTAGATATAACTAAGCCTAAATTTATAAAGCAACAAGAACGACAGTTGCGA
GAACAGTATGGCGCAAAAGTAGATATATCGATAAAAAAATCAGTCGGCAAAATCTCATTTGAGTTTGAATCGCAAGATGA
CTTTGTGAGAATCATTGAACAATTAAATCGTAAGTATGGTAAATAG

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(22-109)

HTH domain found in ParB protein (HTH_ParB)

(161-210)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

40.996

92.883

0.381