Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACFIOF_RS04930 Genome accession   NZ_CP170397
Coordinates   923512..924252 (+) Length   246 a.a.
NCBI ID   WP_000216874.1    Uniprot ID   -
Organism   Staphylococcus aureus strain t3841     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 918512..929252
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFIOF_RS04905 yhaM 918930..919871 (+) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -
  ACFIOF_RS04910 - 919992..920954 (-) 963 WP_000782127.1 foldase protein PrsA -
  ACFIOF_RS04915 - 921159..921716 (-) 558 WP_000477957.1 DUF3267 domain-containing protein -
  ACFIOF_RS04920 - 922449..922814 (-) 366 WP_000648118.1 YtxH domain-containing protein -
  ACFIOF_RS04925 - 922956..923378 (-) 423 WP_000004981.1 HIT family protein -
  ACFIOF_RS04930 pptA 923512..924252 (+) 741 WP_000216874.1 ABC transporter ATP-binding protein EcsA Regulator
  ACFIOF_RS04935 ecsB 924245..925468 (+) 1224 WP_000551839.1 ABC transporter permease EcsB -
  ACFIOF_RS04940 traP 925592..926095 (-) 504 WP_000737978.1 signal transduction protein TRAP -
  ACFIOF_RS04945 - 926258..926368 (+) 111 WP_001790154.1 hypothetical protein -
  ACFIOF_RS04950 hemE 926358..927395 (+) 1038 WP_000233526.1 uroporphyrinogen decarboxylase -
  ACFIOF_RS04955 hemH 927453..928376 (+) 924 WP_000162872.1 ferrochelatase -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.02 Da        Isoelectric Point: 4.6672

>NTDB_id=942976 ACFIOF_RS04930 WP_000216874.1 923512..924252(+) (pptA) [Staphylococcus aureus strain t3841]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=942976 ACFIOF_RS04930 WP_000216874.1 923512..924252(+) (pptA) [Staphylococcus aureus strain t3841]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATTGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGCCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545