Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   ACFIOJ_RS11720 Genome accession   NZ_CP170391
Coordinates   2363077..2363922 (-) Length   281 a.a.
NCBI ID   WP_054189506.1    Uniprot ID   -
Organism   Staphylococcus aureus strain t21642     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2358077..2368922
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFIOJ_RS11685 rpsR 2359063..2359305 (-) 243 WP_000897044.1 30S ribosomal protein S18 -
  ACFIOJ_RS11690 ssbA 2359357..2359860 (-) 504 WP_000934799.1 single-stranded DNA-binding protein Machinery gene
  ACFIOJ_RS11695 rpsF 2359881..2360177 (-) 297 WP_001261460.1 30S ribosomal protein S6 -
  ACFIOJ_RS11700 - 2360422..2360613 (+) 192 WP_001052483.1 hypothetical protein -
  ACFIOJ_RS11705 ychF 2360699..2361796 (-) 1098 WP_001218732.1 redox-regulated ATPase YchF -
  ACFIOJ_RS11710 - 2361808..2362011 (-) 204 WP_000157348.1 DUF951 domain-containing protein -
  ACFIOJ_RS11715 - 2362041..2362922 (-) 882 WP_000373075.1 mechanosensitive ion channel family protein -
  ACFIOJ_RS11720 spo0J 2363077..2363922 (-) 846 WP_054189506.1 ParB/RepB/Spo0J family partition protein Regulator
  ACFIOJ_RS11725 - 2364585..2365688 (+) 1104 WP_410532923.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  ACFIOJ_RS11730 metC 2365685..2366845 (+) 1161 WP_410532924.1 cystathionine beta-lyase MetC -
  ACFIOJ_RS11735 - 2366814..2368655 (+) 1842 WP_410532926.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -

Sequence

Protein


Download         Length: 281 a.a.        Molecular weight: 32770.79 Da        Isoelectric Point: 10.0000

>NTDB_id=942865 ACFIOJ_RS11720 WP_054189506.1 2363077..2363922(-) (spo0J) [Staphylococcus aureus strain t21642]
MSELSKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLESHVNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGAKVDISIKKSVGKISFEFESQDDFVRLIEQLNRKYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=942865 ACFIOJ_RS11720 WP_054189506.1 2363077..2363922(-) (spo0J) [Staphylococcus aureus strain t21642]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAACAAATAGATATATCGGA
TATCAAACCGAATCCTTATCAACCTAGAAAAACATTCGATGAAAATCATTTAAATGATTTAGCAGATTCGATTAAGCAAT
ATGGAATTTTGCAACCAATTGTGCTTAGAAAAACAGTTCAAGGTTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATATGTATCAGCGATTATTAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAGCGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTACCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGCGTTAGATATTTAGAAAGCCATGTCAATGAATTAAAAA
ATGTTTCGTCAAAATCGGAAACAGATAAAGTAGATATAACTAAGCCTAAATTTATAAAGCAACAAGAACGACAGTTGCGA
GAACAGTATGGCGCAAAAGTGGATATATCGATAAAAAAATCAGTCGGCAAAATCTCATTTGAGTTTGAATCACAAGATGA
CTTTGTGAGGTTAATTGAACAATTAAATCGTAAGTATGGTAAATAG

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(22-109)

HTH domain found in ParB protein (HTH_ParB)

(161-210)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.379

92.883

0.384