Detailed information NTG0942804

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: V8J79_RS14160
• Genome accession: NZ_CP146376
• Coordinates: 3014381..3015535 (+)
• Length: 384 a.a.
• NCBI ID: WP_047899060.1
• Uniprot ID: -
• Organism: Burkholderia pyrrocinia strain JBC226
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3009381..3020535

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V8J79_RS14130 (V8J79_14130)	-	3010022..3010627 (+)	606	WP_047899057.1	50S ribosomal protein L25/general stress protein Ctc	-
V8J79_RS14135 (V8J79_14135)	pth	3010748..3011347 (+)	600	WP_034179071.1	aminoacyl-tRNA hydrolase	-
V8J79_RS14140 (V8J79_14140)	hisC	3011463..3012530 (+)	1068	WP_047899058.1	histidinol-phosphate transaminase	-
V8J79_RS14145 (V8J79_14145)	-	3012615..3012881 (-)	267	WP_006477774.1	YfhL family 4Fe-4S dicluster ferredoxin	-
V8J79_RS14150 (V8J79_14150)	coaD	3012941..3013438 (-)	498	WP_021163047.1	pantetheine-phosphate adenylyltransferase	-
V8J79_RS14155 (V8J79_14155)	rsmD	3013550..3014164 (-)	615	WP_047899059.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
V8J79_RS14160 (V8J79_14160)	pilA	3014381..3015535 (+)	1155	WP_047899060.1	signal recognition particle-docking protein FtsY	Machinery gene
V8J79_RS14165 (V8J79_14165)	maiA	3015607..3016251 (-)	645	WP_338638551.1	maleylacetoacetate isomerase	-
V8J79_RS14170 (V8J79_14170)	ybiB	3016446..3017420 (+)	975	WP_047899062.1	DNA-binding protein YbiB	-
V8J79_RS14175 (V8J79_14175)	leuA	3017800..3019446 (+)	1647	WP_338638552.1	2-isopropylmalate synthase	-
V8J79_RS14180 (V8J79_14180)	-	3019578..3019961 (-)	384	WP_047899064.1	nuclear transport factor 2 family protein	-

Sequence

Protein

• Length: 384 a.a.
• Molecular weight: 40990.87 Da
• Isoelectric Point: 4.8019

>NTDB_id=942804 V8J79_RS14160 WP_047899060.1 3014381..3015535(+) (pilA) [Burkholderia pyrrocinia strain JBC226]
MFSFFKRFKKTQEPDPAESQSADASQTDEPSDAPAVDAPPAADVPQAPVQPAAPAVVMTVTPTNDGRDEVVETVEIVPPP
LQDASAKKSWLARLKTGLAKTGSSITGVFVNTKIDEDLYEELETALLMSDAGVDATEYLLDALREKVRTGRLTDPQQVKS
ALHDLLVELLKPLEKSLMLGRAQPLVMMITGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAVWGERNNV
TVVQQESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVISKAHDGSPHEVLLVIDANTGQNALTQ
VKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAVEFADALLG

Nucleotide

• Length: 1155 bp

>NTDB_id=942804 V8J79_RS14160 WP_047899060.1 3014381..3015535(+) (pilA) [Burkholderia pyrrocinia strain JBC226]
ATGTTCAGCTTCTTCAAACGATTCAAGAAAACGCAGGAGCCCGATCCCGCGGAATCGCAATCGGCCGACGCGTCGCAAAC
GGACGAGCCGTCCGATGCGCCCGCGGTCGACGCTCCGCCCGCGGCCGACGTGCCGCAGGCGCCCGTGCAACCGGCCGCGC
CGGCCGTCGTGATGACGGTCACGCCGACCAACGACGGCCGCGACGAAGTCGTCGAGACGGTCGAGATCGTCCCGCCGCCG
CTGCAGGACGCATCCGCGAAGAAATCGTGGCTTGCGCGCCTGAAAACGGGGCTCGCGAAGACCGGCTCCAGCATCACCGG
CGTATTCGTCAACACGAAGATCGACGAGGATCTGTACGAGGAGCTCGAAACCGCGCTGCTGATGTCCGACGCGGGCGTCG
ACGCGACCGAATACCTGCTCGACGCGCTGCGCGAAAAGGTGCGCACGGGCCGGCTGACCGACCCGCAGCAGGTGAAGAGT
GCGCTGCACGACCTGCTCGTCGAGCTGCTGAAGCCGCTCGAGAAATCGCTGATGCTCGGCCGCGCGCAGCCGCTCGTGAT
GATGATCACGGGCGTGAACGGCGCGGGCAAGACGACCAGCATCGGCAAGCTCGCGAAGCATCTGCAGAGCTTCGACCAGT
CGGTGTTGCTGGCCGCGGGCGACACGTTCCGCGCGGCCGCGCGCGAACAGCTGGCGGTCTGGGGCGAGCGCAACAACGTG
ACGGTCGTGCAGCAGGAAAGCGGCGATCCGGCCGCGGTGATCTTCGACGCGGTCAGCGCCGCGCGCGCGCGCAAGATCGA
CGTGATGATGGCCGACACGGCCGGCCGCCTGCCGACGCAGCTCCACCTGATGGAAGAGCTGAAGAAGGTGAAGCGCGTGA
TCTCGAAGGCGCACGACGGCTCGCCGCACGAAGTGCTGCTGGTGATCGACGCGAACACCGGCCAGAACGCGCTCACGCAG
GTGAAGGCATTCGACGACGCGCTCGGCCTCACGGGCCTCATCGTCACGAAGCTCGACGGCACCGCGAAGGGCGGGATTCT
CGCCGCGATCGCGCGGCAACGCCCGGTGCCCGTCTACTTCATCGGCGTCGGCGAGAAGGTCGAGGACCTGCAGCCGTTCA
GCGCCGTGGAATTCGCGGACGCGCTGCTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (185-384)

• SRP54-type protein, helical bundle domain (SRP54_N) (102-164)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.606	100	0.581