Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACFIOJ_RS04655 Genome accession   NZ_CP170391
Coordinates   889184..889924 (+) Length   246 a.a.
NCBI ID   WP_025788462.1    Uniprot ID   -
Organism   Staphylococcus aureus strain t21642     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 884184..894924
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFIOJ_RS04630 yhaM 884601..885542 (+) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -
  ACFIOJ_RS04635 - 885663..886625 (-) 963 WP_410533715.1 peptidylprolyl isomerase -
  ACFIOJ_RS04640 - 886830..887387 (-) 558 WP_410533717.1 DUF3267 domain-containing protein -
  ACFIOJ_RS04645 - 888121..888486 (-) 366 WP_000648118.1 YtxH domain-containing protein -
  ACFIOJ_RS04650 - 888628..889050 (-) 423 WP_000004981.1 HIT family protein -
  ACFIOJ_RS04655 pptA 889184..889924 (+) 741 WP_025788462.1 ABC transporter ATP-binding protein EcsA Regulator
  ACFIOJ_RS04660 ecsB 889917..891140 (+) 1224 WP_410533719.1 ABC transporter permease EcsB -
  ACFIOJ_RS04665 traP 891264..891767 (-) 504 WP_000737983.1 signal transduction protein TRAP -
  ACFIOJ_RS04670 - 891952..892038 (+) 87 WP_031875110.1 hypothetical protein -
  ACFIOJ_RS04675 hemE 892028..893065 (+) 1038 WP_000233540.1 uroporphyrinogen decarboxylase -
  ACFIOJ_RS04680 hemH 893123..894046 (+) 924 WP_410533721.1 ferrochelatase -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27713.05 Da        Isoelectric Point: 4.5973

>NTDB_id=942801 ACFIOJ_RS04655 WP_025788462.1 889184..889924(+) (pptA) [Staphylococcus aureus strain t21642]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVYA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=942801 ACFIOJ_RS04655 WP_025788462.1 889184..889924(+) (pptA) [Staphylococcus aureus strain t21642]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATTGTTGGACTTATTGGCCTTAATGGCGCCGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGCCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTATATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545