Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ACFIOJ_RS04315 Genome accession   NZ_CP170391
Coordinates   842463..843281 (+) Length   272 a.a.
NCBI ID   WP_410533698.1    Uniprot ID   -
Organism   Staphylococcus aureus strain t21642     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 837463..848281
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFIOJ_RS04290 - 838079..838609 (+) 531 WP_000184383.1 acyl-CoA thioesterase -
  ACFIOJ_RS04295 yfkAB 838872..840023 (-) 1152 WP_410534039.1 radical SAM/CxCxxxxC motif protein YfkAB -
  ACFIOJ_RS04300 - 840247..840408 (+) 162 WP_001005407.1 SE1561 family protein -
  ACFIOJ_RS04305 - 840538..841053 (+) 516 WP_410533697.1 type 1 glutamine amidotransferase domain-containing protein -
  ACFIOJ_RS04310 sgtB 841393..842202 (+) 810 WP_054189640.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  ACFIOJ_RS04315 recX 842463..843281 (+) 819 WP_410533698.1 recombination regulator RecX Regulator
  ACFIOJ_RS04320 - 843259..843573 (+) 315 WP_000435806.1 YfhH family protein -
  ACFIOJ_RS04325 - 843588..845105 (+) 1518 WP_031898543.1 ABC transporter ATP-binding protein -
  ACFIOJ_RS04330 - 845114..845950 (+) 837 WP_410533699.1 hypothetical protein -
  ACFIOJ_RS04335 - 846211..847188 (-) 978 WP_410533701.1 metal-dependent hydrolase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32283.15 Da        Isoelectric Point: 6.8877

>NTDB_id=942799 ACFIOJ_RS04315 WP_410533698.1 842463..843281(+) (recX) [Staphylococcus aureus strain t21642]
MPKITKIEVQKKNKERFNLFLDEKFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEFCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEKFTELYREQQEFDD
IIHIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=942799 ACFIOJ_RS04315 WP_410533698.1 842463..843281(+) (recX) [Staphylococcus aureus strain t21642]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACGAAAAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGAATAGGTTTAAATAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATTTTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGTACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAAAGTTTACAGAACTTTATAGAGAACAACAGGAATTTGATGAT
ATTATCCACATTGCTGAAAAAATATCTAAAACAAAAAAAGGACCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGATTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

98.162

100

0.982