Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | V6986_RS06595 | Genome accession | NZ_CP146358 |
| Coordinates | 1342400..1344502 (-) | Length | 700 a.a. |
| NCBI ID | WP_059376921.1 | Uniprot ID | - |
| Organism | Bacillus safensis strain yw6 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1337400..1349502
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V6986_RS06570 (V6986_06570) | - | 1337841..1338083 (+) | 243 | WP_039178071.1 | aspartyl-phosphate phosphatase Spo0E family protein | - |
| V6986_RS06575 (V6986_06575) | - | 1338130..1339635 (-) | 1506 | WP_338595101.1 | ATP-binding protein | - |
| V6986_RS06580 (V6986_06580) | - | 1339840..1340295 (+) | 456 | WP_034281539.1 | MarR family transcriptional regulator | - |
| V6986_RS06585 (V6986_06585) | motB | 1340463..1341233 (-) | 771 | WP_039178076.1 | flagellar motor protein MotB | - |
| V6986_RS06590 (V6986_06590) | motA | 1341226..1342020 (-) | 795 | WP_024424680.1 | flagellar motor stator protein MotA | - |
| V6986_RS06595 (V6986_06595) | clpC | 1342400..1344502 (-) | 2103 | WP_059376921.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| V6986_RS06600 (V6986_06600) | - | 1344747..1345790 (+) | 1044 | WP_059376923.1 | hypothetical protein | - |
| V6986_RS06605 (V6986_06605) | queC | 1346066..1346722 (+) | 657 | WP_059376926.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| V6986_RS06610 (V6986_06610) | queD | 1346723..1347163 (+) | 441 | WP_048238732.1 | 6-carboxytetrahydropterin synthase QueD | - |
| V6986_RS06615 (V6986_06615) | queE | 1347156..1347887 (+) | 732 | WP_047202223.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| V6986_RS06620 (V6986_06620) | queF | 1347903..1348400 (+) | 498 | WP_003211403.1 | preQ(1) synthase | - |
| V6986_RS06625 (V6986_06625) | - | 1348855..1349073 (+) | 219 | WP_039178087.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 700 a.a. Molecular weight: 77915.50 Da Isoelectric Point: 5.0302
>NTDB_id=942730 V6986_RS06595 WP_059376921.1 1342400..1344502(-) (clpC) [Bacillus safensis strain yw6]
MRCQHCQVNEATIRLNMQVNSSRSQMVLCEDCYTSLMEQSKMKMGPQLFGGSSFFSQQAGHAPNMEQPKQKGLLDELGRN
LTDGANAGLIDPVIGRDEEVARVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIASGDVPNKLKNKQIYLLDVSSLVA
NTGVRGQFEERMKQLIKELQSRKNIILFVDEIHLLVGAGSAEGSMDAGNILKPALARGELQLVGATTLKEYRQIEKDAAL
ERRFQPVIVDEPTPDEAIDILKGIQDKYEAYHGVTYSDEAIKACVQLSSRYIQDRHLPDKAIDLMDEAGSKANLSIDAAS
EDELTNRLAQIAAEKQAALKEEQYEKAAKLRDEEEAIEARLQNKTTDKEHIVTAEDIQAIVEQKTGIPVGKLQADEQTKM
KEIDVRLKARVIGQEHAVDKVAKAVKRSRAGLKSKHRPTGSFLFVGPTGVGKTELSKTLAEELFGSRDAIIRLDMSEYME
KHSVSKLIGSPPGYVGHDEAGQLTEKVRRKPYSIILLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN
AGSADKTVKVGFQSDQDEAIEEQSLIDSLSSYFKPEFLNRFDSIIQFDSLDREDLVKIVDLLLNELSEQLKEQNLTVHVT
NEAKEKIAELGYHPAFGARPLRRTIQEHVEDQMTEILLEEEQLSGFTVDVEHDEIVVKKG
MRCQHCQVNEATIRLNMQVNSSRSQMVLCEDCYTSLMEQSKMKMGPQLFGGSSFFSQQAGHAPNMEQPKQKGLLDELGRN
LTDGANAGLIDPVIGRDEEVARVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIASGDVPNKLKNKQIYLLDVSSLVA
NTGVRGQFEERMKQLIKELQSRKNIILFVDEIHLLVGAGSAEGSMDAGNILKPALARGELQLVGATTLKEYRQIEKDAAL
ERRFQPVIVDEPTPDEAIDILKGIQDKYEAYHGVTYSDEAIKACVQLSSRYIQDRHLPDKAIDLMDEAGSKANLSIDAAS
EDELTNRLAQIAAEKQAALKEEQYEKAAKLRDEEEAIEARLQNKTTDKEHIVTAEDIQAIVEQKTGIPVGKLQADEQTKM
KEIDVRLKARVIGQEHAVDKVAKAVKRSRAGLKSKHRPTGSFLFVGPTGVGKTELSKTLAEELFGSRDAIIRLDMSEYME
KHSVSKLIGSPPGYVGHDEAGQLTEKVRRKPYSIILLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN
AGSADKTVKVGFQSDQDEAIEEQSLIDSLSSYFKPEFLNRFDSIIQFDSLDREDLVKIVDLLLNELSEQLKEQNLTVHVT
NEAKEKIAELGYHPAFGARPLRRTIQEHVEDQMTEILLEEEQLSGFTVDVEHDEIVVKKG
Nucleotide
Download Length: 2103 bp
>NTDB_id=942730 V6986_RS06595 WP_059376921.1 1342400..1344502(-) (clpC) [Bacillus safensis strain yw6]
ATGCGTTGTCAACATTGTCAAGTAAATGAAGCAACTATTCGCCTGAATATGCAAGTAAATTCGTCCCGGAGCCAAATGGT
TTTATGTGAAGACTGCTATACCTCTTTGATGGAGCAGTCAAAAATGAAAATGGGACCTCAGCTTTTTGGAGGAAGTTCAT
TCTTCTCTCAACAGGCAGGTCATGCCCCAAACATGGAGCAGCCAAAACAAAAAGGCTTACTCGATGAGCTTGGGCGTAAC
TTAACAGATGGAGCAAATGCTGGCTTAATTGATCCAGTCATTGGCCGTGATGAAGAAGTCGCAAGAGTCATTGAGATTTT
AAATAGAAGAAATAAAAATAACCCTGTTCTTATTGGTGAACCAGGTGTTGGGAAAACAGCGATCGCAGAAGGACTCGCAC
TGAAAATTGCGAGCGGCGATGTACCAAATAAATTAAAGAACAAACAAATCTATTTATTAGATGTTTCTTCACTTGTCGCA
AACACAGGTGTACGCGGTCAATTTGAGGAAAGAATGAAGCAGTTAATTAAAGAACTTCAGAGCCGTAAAAATATCATCTT
ATTTGTAGATGAAATCCACCTTCTTGTGGGCGCAGGATCTGCAGAAGGATCAATGGATGCTGGAAACATTTTAAAACCAG
CCCTTGCAAGAGGCGAACTGCAGCTAGTAGGTGCGACGACATTAAAAGAATATCGCCAAATTGAAAAAGATGCTGCACTC
GAACGACGCTTCCAGCCCGTTATCGTGGATGAGCCAACACCAGATGAAGCGATCGACATCTTAAAAGGCATTCAAGATAA
GTACGAGGCCTATCATGGTGTCACCTATTCAGATGAAGCCATCAAAGCGTGCGTTCAATTATCTTCCCGGTATATTCAAG
ACCGTCATTTGCCGGATAAAGCCATTGATCTAATGGATGAAGCTGGTTCAAAAGCGAACCTCTCCATTGATGCTGCAAGT
GAAGATGAACTGACAAACCGACTTGCGCAAATTGCCGCAGAAAAACAGGCTGCGCTAAAAGAAGAACAATATGAAAAAGC
AGCGAAGCTTCGCGACGAAGAAGAAGCGATAGAAGCAAGACTTCAAAACAAAACAACTGACAAAGAGCATATTGTCACAG
CAGAGGACATTCAGGCCATTGTGGAACAAAAAACAGGCATTCCTGTCGGCAAACTGCAAGCAGACGAACAAACCAAAATG
AAAGAAATTGATGTCCGTCTAAAAGCACGAGTAATTGGGCAGGAGCATGCGGTTGATAAAGTGGCGAAAGCCGTGAAAAG
AAGCAGAGCTGGATTAAAATCGAAACATAGACCGACAGGCTCCTTCCTTTTCGTAGGACCAACAGGTGTCGGGAAAACCG
AATTGTCTAAAACGCTGGCTGAAGAATTATTCGGTTCAAGAGATGCGATCATTCGTTTAGATATGAGTGAGTATATGGAA
AAACACTCTGTGTCCAAACTCATCGGTTCTCCTCCTGGTTATGTTGGACATGATGAAGCTGGCCAGCTGACTGAAAAAGT
GCGCAGAAAACCTTACAGCATCATTTTGCTGGATGAAATCGAAAAAGCACACCCAGATGTACAGCACATGTTCCTTCAAA
TCATGGAAGATGGCCGTTTAACAGACAGCCAAGGTAGAACGGTCAGCTTTAAAGATACAGTCATCATCATGACAAGTAAC
GCAGGCAGCGCAGATAAAACGGTCAAGGTCGGCTTCCAGTCTGATCAGGACGAAGCGATTGAGGAACAATCACTCATTGA
TTCGCTCAGCAGCTATTTCAAACCAGAATTTTTGAACCGTTTTGACAGCATCATTCAATTTGATTCACTAGACAGAGAGG
ACTTAGTGAAGATTGTTGATCTTCTGCTCAATGAACTGTCAGAGCAATTAAAAGAACAAAATTTAACAGTCCATGTCACA
AATGAAGCGAAAGAAAAAATCGCAGAGCTTGGATATCACCCTGCATTTGGTGCTCGTCCACTTCGAAGAACCATCCAAGA
GCACGTTGAAGATCAAATGACAGAGATCCTGCTTGAAGAGGAGCAGCTTTCTGGATTTACTGTGGATGTTGAACATGACG
AAATCGTCGTAAAAAAAGGATAA
ATGCGTTGTCAACATTGTCAAGTAAATGAAGCAACTATTCGCCTGAATATGCAAGTAAATTCGTCCCGGAGCCAAATGGT
TTTATGTGAAGACTGCTATACCTCTTTGATGGAGCAGTCAAAAATGAAAATGGGACCTCAGCTTTTTGGAGGAAGTTCAT
TCTTCTCTCAACAGGCAGGTCATGCCCCAAACATGGAGCAGCCAAAACAAAAAGGCTTACTCGATGAGCTTGGGCGTAAC
TTAACAGATGGAGCAAATGCTGGCTTAATTGATCCAGTCATTGGCCGTGATGAAGAAGTCGCAAGAGTCATTGAGATTTT
AAATAGAAGAAATAAAAATAACCCTGTTCTTATTGGTGAACCAGGTGTTGGGAAAACAGCGATCGCAGAAGGACTCGCAC
TGAAAATTGCGAGCGGCGATGTACCAAATAAATTAAAGAACAAACAAATCTATTTATTAGATGTTTCTTCACTTGTCGCA
AACACAGGTGTACGCGGTCAATTTGAGGAAAGAATGAAGCAGTTAATTAAAGAACTTCAGAGCCGTAAAAATATCATCTT
ATTTGTAGATGAAATCCACCTTCTTGTGGGCGCAGGATCTGCAGAAGGATCAATGGATGCTGGAAACATTTTAAAACCAG
CCCTTGCAAGAGGCGAACTGCAGCTAGTAGGTGCGACGACATTAAAAGAATATCGCCAAATTGAAAAAGATGCTGCACTC
GAACGACGCTTCCAGCCCGTTATCGTGGATGAGCCAACACCAGATGAAGCGATCGACATCTTAAAAGGCATTCAAGATAA
GTACGAGGCCTATCATGGTGTCACCTATTCAGATGAAGCCATCAAAGCGTGCGTTCAATTATCTTCCCGGTATATTCAAG
ACCGTCATTTGCCGGATAAAGCCATTGATCTAATGGATGAAGCTGGTTCAAAAGCGAACCTCTCCATTGATGCTGCAAGT
GAAGATGAACTGACAAACCGACTTGCGCAAATTGCCGCAGAAAAACAGGCTGCGCTAAAAGAAGAACAATATGAAAAAGC
AGCGAAGCTTCGCGACGAAGAAGAAGCGATAGAAGCAAGACTTCAAAACAAAACAACTGACAAAGAGCATATTGTCACAG
CAGAGGACATTCAGGCCATTGTGGAACAAAAAACAGGCATTCCTGTCGGCAAACTGCAAGCAGACGAACAAACCAAAATG
AAAGAAATTGATGTCCGTCTAAAAGCACGAGTAATTGGGCAGGAGCATGCGGTTGATAAAGTGGCGAAAGCCGTGAAAAG
AAGCAGAGCTGGATTAAAATCGAAACATAGACCGACAGGCTCCTTCCTTTTCGTAGGACCAACAGGTGTCGGGAAAACCG
AATTGTCTAAAACGCTGGCTGAAGAATTATTCGGTTCAAGAGATGCGATCATTCGTTTAGATATGAGTGAGTATATGGAA
AAACACTCTGTGTCCAAACTCATCGGTTCTCCTCCTGGTTATGTTGGACATGATGAAGCTGGCCAGCTGACTGAAAAAGT
GCGCAGAAAACCTTACAGCATCATTTTGCTGGATGAAATCGAAAAAGCACACCCAGATGTACAGCACATGTTCCTTCAAA
TCATGGAAGATGGCCGTTTAACAGACAGCCAAGGTAGAACGGTCAGCTTTAAAGATACAGTCATCATCATGACAAGTAAC
GCAGGCAGCGCAGATAAAACGGTCAAGGTCGGCTTCCAGTCTGATCAGGACGAAGCGATTGAGGAACAATCACTCATTGA
TTCGCTCAGCAGCTATTTCAAACCAGAATTTTTGAACCGTTTTGACAGCATCATTCAATTTGATTCACTAGACAGAGAGG
ACTTAGTGAAGATTGTTGATCTTCTGCTCAATGAACTGTCAGAGCAATTAAAAGAACAAAATTTAACAGTCCATGTCACA
AATGAAGCGAAAGAAAAAATCGCAGAGCTTGGATATCACCCTGCATTTGGTGCTCGTCCACTTCGAAGAACCATCCAAGA
GCACGTTGAAGATCAAATGACAGAGATCCTGCTTGAAGAGGAGCAGCTTTCTGGATTTACTGTGGATGTTGAACATGACG
AAATCGTCGTAAAAAAAGGATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Lactococcus lactis subsp. cremoris KW2 |
56.64 |
100 |
0.597 |
| clpE | Streptococcus mutans UA159 |
56.199 |
100 |
0.596 |
| clpE | Streptococcus pneumoniae Rx1 |
55.387 |
100 |
0.573 |
| clpE | Streptococcus pneumoniae D39 |
55.387 |
100 |
0.573 |
| clpE | Streptococcus pneumoniae R6 |
55.387 |
100 |
0.573 |
| clpE | Streptococcus pneumoniae TIGR4 |
55.387 |
100 |
0.573 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
54.03 |
95.714 |
0.517 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
47.385 |
92.857 |
0.44 |
| clpC | Streptococcus thermophilus LMD-9 |
46.13 |
92.286 |
0.426 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.975 |
92.286 |
0.424 |
| clpC | Streptococcus mutans UA159 |
44.325 |
93.143 |
0.413 |
| clpC | Streptococcus pneumoniae TIGR4 |
43.981 |
92.571 |
0.407 |
| clpC | Streptococcus pneumoniae Rx1 |
44.168 |
91.857 |
0.406 |
| clpC | Streptococcus pneumoniae D39 |
44.168 |
91.857 |
0.406 |