Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | R8902_RS03065 | Genome accession | NZ_AP028388 |
| Coordinates | 589504..589887 (+) | Length | 127 a.a. |
| NCBI ID | WP_002852281.1 | Uniprot ID | Q9PHN2 |
| Organism | Campylobacter jejuni strain BCH-11399 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 584504..594887
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8902_RS03045 (B11399_05960) | - | 584583..586517 (-) | 1935 | WP_012006667.1 | RNB domain-containing ribonuclease | - |
| R8902_RS03050 (B11399_05970) | ilvC | 586636..587658 (+) | 1023 | WP_002866493.1 | ketol-acid reductoisomerase | - |
| R8902_RS03055 (B11399_05980) | - | 587662..588744 (+) | 1083 | WP_002876692.1 | divergent polysaccharide deacetylase family protein | - |
| R8902_RS03060 (B11399_05990) | dprA | 588734..589507 (+) | 774 | WP_002866495.1 | DNA-processing protein DprA | Machinery gene |
| R8902_RS03065 (B11399_06000) | dprB | 589504..589887 (+) | 384 | WP_002852281.1 | Holliday junction resolvase RuvX | Machinery gene |
| R8902_RS03070 (B11399_06010) | - | 589916..590755 (+) | 840 | WP_002866496.1 | RsmB/NOP family class I SAM-dependent RNA methyltransferase | - |
| R8902_RS03075 (B11399_06020) | msrA | 590931..591428 (-) | 498 | WP_002866497.1 | peptide-methionine (S)-S-oxide reductase MsrA | - |
| R8902_RS03080 (B11399_06030) | ppa | 591469..591987 (-) | 519 | WP_002855031.1 | inorganic diphosphatase | - |
| R8902_RS03085 (B11399_06040) | adk | 591997..592575 (-) | 579 | WP_002855137.1 | adenylate kinase | - |
| R8902_RS03090 (B11399_06050) | aspS | 592572..594323 (-) | 1752 | WP_012006668.1 | aspartate--tRNA ligase | - |
Sequence
Protein
Download Length: 127 a.a. Molecular weight: 14088.59 Da Isoelectric Point: 9.5433
>NTDB_id=94273 R8902_RS03065 WP_002852281.1 589504..589887(+) (dprB) [Campylobacter jejuni strain BCH-11399]
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
Nucleotide
Download Length: 384 bp
>NTDB_id=94273 R8902_RS03065 WP_002852281.1 589504..589887(+) (dprB) [Campylobacter jejuni strain BCH-11399]
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGTATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATTAAAAATTTACTTAAAATACATGAGATTTCTTTAC
TCATTGTTGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCTTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGTATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATTAAAAATTTACTTAAAATACATGAGATTTCTTTAC
TCATTGTTGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCTTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
44.882 |
100 |
0.449 |