Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   V6986_RS04170 Genome accession   NZ_CP146358
Coordinates   882654..883445 (+) Length   263 a.a.
NCBI ID   WP_024425808.1    Uniprot ID   A0AAP7QSG5
Organism   Bacillus safensis strain yw6     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 877654..888445
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6986_RS04135 (V6986_04135) - 877739..878287 (+) 549 WP_039177253.1 thioredoxin family protein -
  V6986_RS04140 (V6986_04140) - 878621..879088 (+) 468 WP_039177256.1 DUF393 domain-containing protein -
  V6986_RS04145 (V6986_04145) - 879125..880381 (-) 1257 WP_039177258.1 transcriptional regulator -
  V6986_RS04150 (V6986_04150) - 880657..881244 (+) 588 WP_039177261.1 nitroreductase -
  V6986_RS04155 (V6986_04155) - 881283..881438 (-) 156 WP_075611052.1 YfhD family protein -
  V6986_RS04160 (V6986_04160) - 881500..881610 (-) 111 WP_017358836.1 YfhE family protein -
  V6986_RS04165 (V6986_04165) - 881663..882559 (-) 897 WP_338594343.1 TIGR01777 family oxidoreductase -
  V6986_RS04170 (V6986_04170) recX 882654..883445 (+) 792 WP_024425808.1 recombination regulator RecX Regulator
  V6986_RS04175 (V6986_04175) - 883449..883763 (+) 315 WP_059377637.1 YfhH family protein -
  V6986_RS04180 (V6986_04180) - 883991..884164 (-) 174 WP_008360604.1 YpzG family protein -
  V6986_RS04185 (V6986_04185) - 884190..884339 (-) 150 WP_003217849.1 small, acid-soluble spore protein K -
  V6986_RS04190 (V6986_04190) - 884456..884728 (+) 273 WP_024425219.1 YfhJ family protein -
  V6986_RS04195 (V6986_04195) - 885027..886010 (+) 984 WP_024425218.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30635.09 Da        Isoelectric Point: 6.6682

>NTDB_id=942716 V6986_RS04170 WP_024425808.1 882654..883445(+) (recX) [Bacillus safensis strain yw6]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDSVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKEIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDTIEQALSQYPDDLQLEE
AVKQVLKLVKKEKNRSAKEIEQRIKLQLQRKGFSFEIIDKALQEAYDGQEEEKEEEALLYMLEKAKRKVGYDGSFEKKMK
VKQFLFRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=942716 V6986_RS04170 WP_024425808.1 882654..883445(+) (recX) [Bacillus safensis strain yw6]
ATGCCCTATATTACAAAAATTTCTGCTCAGAAAAACAATACAGAGCGGGTCAACATCTTTCTTGATGAAAAGTACGCCTT
TAGCGTTGATTTAGATGTGCTCGTCCAGCACGATTTGAAAAAAGGCAAAGAGCTGGACGAAGCAGATATCATTGAGATTC
AATTCGGTGATTCGGTGAAAAAAGGATTTCAGCAGGCCGTTGATTATTTATCCTACCGTATGAGATCAGTGAAAGAAGTC
ACCGATTATTTAACGAAAAAAGAAATCCCGGCACCTGCTATTAGTGAAATTATACACAAATTAAAGCATTATAAGTATGT
AAATGATCTTGAATTTGCAGAAGCCTATGTCAGCACCCATCGCAAAACGAACAGCAAAGGACCGTCCGTCCTAAAAAAAG
AATTGAAGCTCAAGGGGATAGACGATGACACGATTGAGCAGGCGCTATCGCAATACCCTGATGACTTACAGCTCGAGGAA
GCTGTAAAGCAGGTTCTCAAGCTTGTCAAAAAAGAAAAAAATCGTTCTGCAAAAGAGATCGAGCAGCGCATCAAGCTGCA
GCTGCAGCGAAAGGGATTTTCGTTTGAGATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCCCTCCTTTATATGCTGGAGAAGGCAAAACGCAAGGTAGGGTATGACGGATCATTTGAAAAGAAGATGAAA
GTGAAGCAATTTTTATTCAGAAAAGGCTTTGATCTCGATACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

63.878

100

0.639