Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | V6986_RS00585 | Genome accession | NZ_CP146358 |
| Coordinates | 106914..109349 (+) | Length | 811 a.a. |
| NCBI ID | WP_007496263.1 | Uniprot ID | A0A5K1N9Z5 |
| Organism | Bacillus safensis strain yw6 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 101914..114349
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V6986_RS00570 (V6986_00570) | - | 104785..105249 (+) | 465 | WP_003217184.1 | CtsR family transcriptional regulator | - |
| V6986_RS00575 (V6986_00575) | - | 105264..105821 (+) | 558 | WP_024425862.1 | UvrB/UvrC motif-containing protein | - |
| V6986_RS00580 (V6986_00580) | - | 105826..106917 (+) | 1092 | WP_058838237.1 | protein arginine kinase | - |
| V6986_RS00585 (V6986_00585) | clpC | 106914..109349 (+) | 2436 | WP_007496263.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| V6986_RS00590 (V6986_00590) | radA | 109443..110822 (+) | 1380 | WP_025092231.1 | DNA repair protein RadA | Machinery gene |
| V6986_RS00595 (V6986_00595) | disA | 110825..111904 (+) | 1080 | WP_024425581.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| V6986_RS00600 (V6986_00600) | - | 112058..113158 (+) | 1101 | WP_047203808.1 | PIN/TRAM domain-containing protein | - |
| V6986_RS00605 (V6986_00605) | ispD | 113172..113861 (+) | 690 | WP_039175965.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| V6986_RS00610 (V6986_00610) | ispF | 113865..114341 (+) | 477 | WP_003216928.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90025.76 Da Isoelectric Point: 6.2469
>NTDB_id=942712 V6986_RS00585 WP_007496263.1 106914..109349(+) (clpC) [Bacillus safensis strain yw6]
MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQEVSQAIPH
YTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGASAAGSNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSVDESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKEKQGQENSEVSVDDIAMV
VSSWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDESQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
KEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNIEKGQHIVLDVEDG
EIVVKATAATN
MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQEVSQAIPH
YTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGASAAGSNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSVDESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKEKQGQENSEVSVDDIAMV
VSSWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDESQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
KEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNIEKGQHIVLDVEDG
EIVVKATAATN
Nucleotide
Download Length: 2436 bp
>NTDB_id=942712 V6986_RS00585 WP_007496263.1 106914..109349(+) (clpC) [Bacillus safensis strain yw6]
ATGATGTTTGGAAGATTCACTGAAAGAGCTCAAAAGGTATTAGCACTTGCACAAGAAGAAGCCATTCGCCTAGGCCATAA
GAATATTGGTACTGAGCACATTTTACTTGGCCTTGTACGTGAAGGGGAGGGCATCGCTGCCAAAGCGTTAGAAGCACTGG
GCCTTGTTTCAGATAAAATCCAAAAAGAAGTCGAAAGCTTGATTGGAAGAGGGCAAGAGGTGTCTCAAGCTATTCCTCAT
TATACGCCTAGAGCGAAGAAGGTCACTGAGCTTTCAATGGATGAAGCAAGAAAGCTAGGTCATTCCTATGTAGGGACAGA
ACATATTCTATTAGGTCTTATTCGTGAGGGAGAGGGTGTCGCTGCCCGTGTCTTAAATAACCTCGGAGTGAGCTTAAATA
AAGCACGTCAGCAAGTCCTGCAGCTGCTTGGAAGCAATGAAACAGGTGCATCTGCGGCAGGCTCTAATAGCAATGCAAAT
ACACCCACACTTGATAGCTTGGCAAGAGATTTGACTGCTATTGCAAAAGAGGACAGCTTGGACCCAGTCATTGGCCGAAG
CAAAGAAATTCAACGTGTCATTGAGGTTCTAAGTAGAAGAACAAAAAATAACCCTGTGCTGATTGGTGAGCCTGGTGTTG
GTAAAACAGCCATCGCAGAAGGTCTTGCACAGCAAATTATTCATAACGAAGTGCCTGAAATCCTGCGTGATAAACGAGTG
ATGACACTGGATATGGGAACTGTTGTAGCTGGAACGAAATATCGCGGTGAATTCGAGGATCGTTTGAAAAAAGTCATGGA
CGAAATTCGTCAGGCAGGAAATATCATTCTCTTTATCGATGAGCTTCATACACTCATTGGTGCTGGTGGAGCAGAGGGTG
CGATTGATGCGTCTAATATTCTAAAACCATCTTTAGCACGTGGTGAGCTTCAATGTATTGGGGCGACAACATTAGATGAG
TACCGTAAATACATTGAAAAGGATGCTGCGCTTGAACGACGTTTCCAGCCAATTCAAGTAGATCAGCCTTCTGTTGATGA
GAGTATTCAAATCTTAAGAGGACTTAGAGACCGGTATGAAGCACATCACCGTGTGTCTATTACAGATGAAGCGATTGAGG
CGGCAGTGAAGCTGTCTGACCGTTATATCTCTGACCGTTTCCTTCCAGATAAGGCGATTGATTTAATTGATGAGGCAGGT
TCGAAAGTCCGTTTACGTTCGTTCACAACACCGCCTAACCTAAAAGAACTAGAACAAAAGCTGGATGAAGTACGCAAGGA
AAAGGATGCGGCAGTTCAAAGTCAAGAATTTGAAAAAGCAGCTTCTCTTCGCGATACAGAGCAGCGTTTGCGTGAAAAAG
TAGAAGTGACAAAGAAATCATGGAAAGAAAAGCAGGGACAAGAGAATTCAGAGGTATCTGTAGATGATATCGCAATGGTC
GTTTCCAGCTGGACGGGAGTGCCTGTTTCAAAAATTGCTCAAACGGAGACAGATAAGCTTCTGAATATGGAACAATTACT
CCACTCTCGTGTGATCGGGCAGGATGAAGCCGTTGTTGCTGTAGCGAAAGCTGTGAGACGTGCGCGTGCAGGCCTAAAAG
ATCCAAAACGTCCAATCGGTTCCTTTATCTTCTTAGGACCAACAGGGGTTGGTAAAACAGAGCTTGCAAGAGCACTCGCC
GAGTCTATTTTCGGTGATGAAGAAGCAATGATCCGTATTGATATGTCTGAATACATGGAGAAACACTCTACATCCAGACT
TGTTGGGTCACCTCCAGGATATGTCGGTTATGATGAAGGTGGACAGCTGACTGAAAAAGTCAGAAGAAAACCTTATTCTG
TCGTTCTTTTAGACGAGATTGAAAAGGCCCATCCAGATGTATTTAATATCTTACTGCAAGTATTAGAAGATGGTCGTCTA
ACTGATTCTAAAGGGCGTACCGTTGACTTTAGAAATACGATTTTGATCATGACATCAAACGTTGGAGCTAGTGAGTTGAA
GCGCAATAAATACGTTGGCTTTAACGTGCAGGATGAAAGTCAAAATTACAAGGATATGAAAGGCAAAGTGATGGGCGAGT
TGAAACGTGCGTTTAGACCTGAGTTTATCAACCGTATTGATGAAATCATTGTCTTCCACTCGCTAGAGAAGAAACATCTC
AAAGAGATCGTGTCTCTCATGTCTGATCAATTGACAAAACGATTAAAAGAACAAGACCTTTCAATTGAATTGACGGAAGC
AGCAAAAGCGAAGATTGCCGACGAAGGAGTAGATCTTGAGTACGGTGCGCGTCCGTTAAGAAGAGCGATTCAAAAGCATG
TAGAAGATCGACTTTCTGAGGAGCTTCTGAAGGGCAATATTGAAAAAGGTCAACATATCGTATTAGATGTGGAAGATGGA
GAAATTGTCGTAAAAGCGACGGCTGCTACGAACTAA
ATGATGTTTGGAAGATTCACTGAAAGAGCTCAAAAGGTATTAGCACTTGCACAAGAAGAAGCCATTCGCCTAGGCCATAA
GAATATTGGTACTGAGCACATTTTACTTGGCCTTGTACGTGAAGGGGAGGGCATCGCTGCCAAAGCGTTAGAAGCACTGG
GCCTTGTTTCAGATAAAATCCAAAAAGAAGTCGAAAGCTTGATTGGAAGAGGGCAAGAGGTGTCTCAAGCTATTCCTCAT
TATACGCCTAGAGCGAAGAAGGTCACTGAGCTTTCAATGGATGAAGCAAGAAAGCTAGGTCATTCCTATGTAGGGACAGA
ACATATTCTATTAGGTCTTATTCGTGAGGGAGAGGGTGTCGCTGCCCGTGTCTTAAATAACCTCGGAGTGAGCTTAAATA
AAGCACGTCAGCAAGTCCTGCAGCTGCTTGGAAGCAATGAAACAGGTGCATCTGCGGCAGGCTCTAATAGCAATGCAAAT
ACACCCACACTTGATAGCTTGGCAAGAGATTTGACTGCTATTGCAAAAGAGGACAGCTTGGACCCAGTCATTGGCCGAAG
CAAAGAAATTCAACGTGTCATTGAGGTTCTAAGTAGAAGAACAAAAAATAACCCTGTGCTGATTGGTGAGCCTGGTGTTG
GTAAAACAGCCATCGCAGAAGGTCTTGCACAGCAAATTATTCATAACGAAGTGCCTGAAATCCTGCGTGATAAACGAGTG
ATGACACTGGATATGGGAACTGTTGTAGCTGGAACGAAATATCGCGGTGAATTCGAGGATCGTTTGAAAAAAGTCATGGA
CGAAATTCGTCAGGCAGGAAATATCATTCTCTTTATCGATGAGCTTCATACACTCATTGGTGCTGGTGGAGCAGAGGGTG
CGATTGATGCGTCTAATATTCTAAAACCATCTTTAGCACGTGGTGAGCTTCAATGTATTGGGGCGACAACATTAGATGAG
TACCGTAAATACATTGAAAAGGATGCTGCGCTTGAACGACGTTTCCAGCCAATTCAAGTAGATCAGCCTTCTGTTGATGA
GAGTATTCAAATCTTAAGAGGACTTAGAGACCGGTATGAAGCACATCACCGTGTGTCTATTACAGATGAAGCGATTGAGG
CGGCAGTGAAGCTGTCTGACCGTTATATCTCTGACCGTTTCCTTCCAGATAAGGCGATTGATTTAATTGATGAGGCAGGT
TCGAAAGTCCGTTTACGTTCGTTCACAACACCGCCTAACCTAAAAGAACTAGAACAAAAGCTGGATGAAGTACGCAAGGA
AAAGGATGCGGCAGTTCAAAGTCAAGAATTTGAAAAAGCAGCTTCTCTTCGCGATACAGAGCAGCGTTTGCGTGAAAAAG
TAGAAGTGACAAAGAAATCATGGAAAGAAAAGCAGGGACAAGAGAATTCAGAGGTATCTGTAGATGATATCGCAATGGTC
GTTTCCAGCTGGACGGGAGTGCCTGTTTCAAAAATTGCTCAAACGGAGACAGATAAGCTTCTGAATATGGAACAATTACT
CCACTCTCGTGTGATCGGGCAGGATGAAGCCGTTGTTGCTGTAGCGAAAGCTGTGAGACGTGCGCGTGCAGGCCTAAAAG
ATCCAAAACGTCCAATCGGTTCCTTTATCTTCTTAGGACCAACAGGGGTTGGTAAAACAGAGCTTGCAAGAGCACTCGCC
GAGTCTATTTTCGGTGATGAAGAAGCAATGATCCGTATTGATATGTCTGAATACATGGAGAAACACTCTACATCCAGACT
TGTTGGGTCACCTCCAGGATATGTCGGTTATGATGAAGGTGGACAGCTGACTGAAAAAGTCAGAAGAAAACCTTATTCTG
TCGTTCTTTTAGACGAGATTGAAAAGGCCCATCCAGATGTATTTAATATCTTACTGCAAGTATTAGAAGATGGTCGTCTA
ACTGATTCTAAAGGGCGTACCGTTGACTTTAGAAATACGATTTTGATCATGACATCAAACGTTGGAGCTAGTGAGTTGAA
GCGCAATAAATACGTTGGCTTTAACGTGCAGGATGAAAGTCAAAATTACAAGGATATGAAAGGCAAAGTGATGGGCGAGT
TGAAACGTGCGTTTAGACCTGAGTTTATCAACCGTATTGATGAAATCATTGTCTTCCACTCGCTAGAGAAGAAACATCTC
AAAGAGATCGTGTCTCTCATGTCTGATCAATTGACAAAACGATTAAAAGAACAAGACCTTTCAATTGAATTGACGGAAGC
AGCAAAAGCGAAGATTGCCGACGAAGGAGTAGATCTTGAGTACGGTGCGCGTCCGTTAAGAAGAGCGATTCAAAAGCATG
TAGAAGATCGACTTTCTGAGGAGCTTCTGAAGGGCAATATTGAAAAAGGTCAACATATCGTATTAGATGTGGAAGATGGA
GAAATTGTCGTAAAAGCGACGGCTGCTACGAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
96.054 |
100 |
0.961 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.383 |
99.877 |
0.493 |
| clpC | Streptococcus thermophilus LMD-9 |
46.489 |
100 |
0.473 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.126 |
100 |
0.47 |
| clpC | Streptococcus pneumoniae Rx1 |
45.679 |
99.877 |
0.456 |
| clpC | Streptococcus pneumoniae D39 |
45.679 |
99.877 |
0.456 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.679 |
99.877 |
0.456 |
| clpC | Streptococcus mutans UA159 |
43.675 |
100 |
0.451 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
49.088 |
87.916 |
0.432 |
| clpE | Streptococcus mutans UA159 |
53.323 |
79.778 |
0.425 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.713 |
79.531 |
0.419 |
| clpE | Streptococcus pneumoniae Rx1 |
52.713 |
79.531 |
0.419 |
| clpE | Streptococcus pneumoniae D39 |
52.713 |
79.531 |
0.419 |
| clpE | Streptococcus pneumoniae R6 |
52.713 |
79.531 |
0.419 |