Detailed information
Bioinformatically predicted
Overview
| Name | waaF | Type | Regulator |
| Locus tag | R8631_RS06380 | Genome accession | NZ_AP028387 |
| Coordinates | 1209438..1210391 (+) | Length | 317 a.a. |
| NCBI ID | WP_107701923.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain BCH-11353 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1204438..1215391
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8631_RS06350 (B11353_12850) | neuC | 1205014..1206138 (+) | 1125 | WP_317647826.1 | UDP-N-acetylglucosamine 2-epimerase | - |
| R8631_RS06355 (B11353_12860) | - | 1206131..1206748 (+) | 618 | WP_167562429.1 | glycosyltransferase | - |
| R8631_RS06360 (B11353_12870) | - | 1206745..1207077 (+) | 333 | WP_019260376.1 | hypothetical protein | - |
| R8631_RS06365 (B11353_12880) | - | 1207074..1207739 (+) | 666 | WP_002869017.1 | cytidylyltransferase domain-containing protein | - |
| R8631_RS06370 (B11353_12890) | - | 1207727..1208560 (+) | 834 | WP_002882959.1 | CatB-related O-acetyltransferase | - |
| R8631_RS06375 (B11353_12900) | - | 1208552..1209379 (-) | 828 | WP_052785832.1 | glycosyltransferase family 2 protein | - |
| R8631_RS06380 (B11353_12910) | waaF | 1209438..1210391 (+) | 954 | WP_107701923.1 | glycosyltransferase family 9 protein | Regulator |
| R8631_RS06385 (B11353_12920) | - | 1210398..1211153 (-) | 756 | WP_002869013.1 | glycosyltransferase family 25 protein | - |
| R8631_RS06390 (B11353_12930) | gmhA | 1211153..1211713 (-) | 561 | WP_107701924.1 | D-sedoheptulose 7-phosphate isomerase | - |
| R8631_RS06395 (B11353_12940) | rfaE1 | 1211710..1213095 (-) | 1386 | WP_107701925.1 | D-glycero-beta-D-manno-heptose-7-phosphate kinase | - |
| R8631_RS06400 (B11353_12950) | rfaD | 1213088..1214041 (-) | 954 | WP_052802041.1 | ADP-glyceromanno-heptose 6-epimerase | - |
| R8631_RS06405 (B11353_12960) | gmhB | 1214043..1214604 (-) | 562 | Protein_1241 | D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase | - |
| R8631_RS06410 (B11353_12970) | - | 1214685..1214987 (+) | 303 | WP_052785829.1 | c-type cytochrome | - |
| R8631_RS06415 (B11353_12980) | ccoS | 1215011..1215217 (-) | 207 | WP_002852798.1 | cbb3-type cytochrome oxidase assembly protein CcoS | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36534.16 Da Isoelectric Point: 10.2875
>NTDB_id=94238 R8631_RS06380 WP_107701923.1 1209438..1210391(+) (waaF) [Campylobacter jejuni strain BCH-11353]
MKIFIHLPTWLGDAVMASLALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLHIKAHLKDLKLPFKLKFQSPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENARWVHLNLACMPCMQKTCPLKHHKCMKDLKPEIIIEVSKQLLFLN
MKIFIHLPTWLGDAVMASLALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLHIKAHLKDLKLPFKLKFQSPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENARWVHLNLACMPCMQKTCPLKHHKCMKDLKPEIIIEVSKQLLFLN
Nucleotide
Download Length: 954 bp
>NTDB_id=94238 R8631_RS06380 WP_107701923.1 1209438..1210391(+) (waaF) [Campylobacter jejuni strain BCH-11353]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCGCTTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTACAAACAAGCCCTATCCTTACGCAAAGAACTTGGCAAAATCGATTTTAGCTTTGCT
TTTAGGTCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAGCAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTCACATAAAAGCTCACCTTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAGCCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAGATGGGTGCATTTAAATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAACCAGAAATCATCATAGAAGTAAGTAAACAATTGCTATTTCTAAATTAA
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCGCTTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTACAAACAAGCCCTATCCTTACGCAAAGAACTTGGCAAAATCGATTTTAGCTTTGCT
TTTAGGTCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAGCAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTCACATAAAAGCTCACCTTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAGCCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAGATGGGTGCATTTAAATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAACCAGAAATCATCATAGAAGTAAGTAAACAATTGCTATTTCTAAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| waaF | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
92.675 |
99.054 |
0.918 |