Detailed information NTG0942254

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: VP398_RS07865
• Genome accession: NZ_CP146231
• Coordinates: 1659240..1660394 (-)
• Length: 384 a.a.
• NCBI ID: WP_000755281.1
• Uniprot ID: A0A059ZKS3
• Organism: Acinetobacter baumannii strain G20AB08
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1654240..1665394

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VP398_RS07845 (VP398_07845)	-	1655401..1656051 (+)	651	WP_001984979.1	TetR/AcrR family transcriptional regulator	-
VP398_RS07850 (VP398_07850)	-	1656157..1657077 (+)	921	WP_002000451.1	DMT family transporter	-
VP398_RS07855 (VP398_07855)	-	1657469..1658038 (-)	570	WP_000633612.1	Sua5/YciO/YrdC/YwlC family protein	-
VP398_RS07860 (VP398_07860)	dprA	1658089..1659219 (-)	1131	WP_002017176.1	DNA-processing protein DprA	Machinery gene
VP398_RS07865 (VP398_07865)	tsaP	1659240..1660394 (-)	1155	WP_000755281.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
VP398_RS07870 (VP398_07870)	def	1660517..1661047 (+)	531	WP_001196539.1	peptide deformylase	-
VP398_RS07875 (VP398_07875)	-	1661084..1661512 (+)	429	WP_000231985.1	DUF2946 family protein	-
VP398_RS07880 (VP398_07880)	-	1661584..1663698 (+)	2115	WP_001120663.1	TonB-dependent copper receptor	-
VP398_RS07885 (VP398_07885)	-	1663752..1663958 (+)	207	WP_000182542.1	hypothetical protein	-
VP398_RS07890 (VP398_07890)	-	1664028..1665242 (-)	1215	WP_001177965.1	oxygenase MpaB family protein	-

Sequence

Protein

• Length: 384 a.a.
• Molecular weight: 42350.28 Da
• Isoelectric Point: 8.5816

>NTDB_id=942254 VP398_RS07865 WP_000755281.1 1659240..1660394(-) (tsaP) [Acinetobacter baumannii strain G20AB08]
MKKVFNGMVNFHALGIKKHLLALALCTGVAIGTIAEVHATSPNHNPPSLKSNAPNVYVVKRGDTLWDISGHFLNKPWRWP
EIWASNQHVKNPHWIYPGDRLLLCSLDGRPLVGKDEGDGCVGIIRRYTGQTTNLQPQVRVEALNNSVPVIPLEHIKQWLE
NSTILPADSITNTPYIVGTADQRVLAGKGQTIYARGQGLINGQRYAVYREGEPYYFTDNKGKKHSLGIELLQVASGVAVS
SEKDITTLELTDSYNAEVRRGDRVMPEEQATLPTLFYPVDAKQVTDGGKIIRVMGSIGRAAKNSVVTLDRGTTQGIQVGQ
VFDITQQGESIRDPKTKEVIQLPGQQIGSLMVFRTFDQLSYAYVLESDLPIKVGSSIQPPQFND

Nucleotide

• Length: 1155 bp

>NTDB_id=942254 VP398_RS07865 WP_000755281.1 1659240..1660394(-) (tsaP) [Acinetobacter baumannii strain G20AB08]
ATGAAAAAGGTTTTTAACGGCATGGTTAATTTTCATGCCTTGGGGATAAAGAAGCATTTACTTGCTTTGGCGCTCTGTAC
AGGTGTCGCAATCGGTACGATAGCAGAGGTTCATGCAACCAGTCCGAACCATAATCCACCCTCCCTTAAAAGTAATGCAC
CCAATGTATATGTTGTAAAACGTGGGGATACTTTATGGGATATTTCAGGACATTTTCTAAATAAACCATGGCGTTGGCCT
GAAATCTGGGCGAGCAACCAACATGTTAAAAATCCACACTGGATCTATCCGGGTGACCGATTACTATTATGTAGCCTAGA
TGGGCGTCCTTTAGTCGGTAAAGATGAGGGCGATGGTTGTGTCGGTATTATTCGCCGCTATACAGGTCAAACCACAAACC
TACAACCACAAGTTCGCGTCGAAGCATTAAATAATAGCGTTCCGGTTATTCCACTTGAACATATTAAACAGTGGTTAGAG
AACAGTACTATTTTACCAGCCGACTCAATTACCAACACACCTTATATTGTTGGTACAGCCGATCAACGTGTACTTGCAGG
AAAAGGCCAGACTATTTATGCACGAGGACAAGGCTTAATTAATGGGCAGCGTTATGCAGTCTACCGAGAAGGTGAACCTT
ACTATTTCACAGACAATAAAGGTAAAAAGCATAGTTTAGGGATTGAGTTACTACAGGTTGCTTCAGGTGTTGCGGTATCT
TCTGAAAAAGATATTACTACATTAGAACTAACAGATAGTTATAACGCTGAAGTACGTCGTGGTGATCGTGTTATGCCTGA
AGAGCAAGCTACTTTGCCAACATTATTTTACCCAGTAGATGCGAAGCAAGTGACGGATGGTGGCAAGATTATTCGTGTCA
TGGGCTCAATTGGTAGAGCTGCAAAAAATAGTGTAGTGACTTTGGATCGCGGTACAACTCAGGGCATTCAAGTAGGTCAA
GTTTTTGATATTACTCAACAAGGTGAATCAATTCGCGACCCTAAAACTAAAGAAGTAATTCAACTTCCTGGCCAACAAAT
TGGCAGTCTAATGGTTTTTAGAACTTTTGATCAGCTAAGTTATGCTTATGTTTTAGAGAGCGATTTACCAATTAAGGTTG
GTTCAAGCATTCAGCCACCTCAATTTAATGATTAA

Domains

Predicted by InterproScan.

• LysM domain (LysM) (57-102)

3D structure

• AlphaFold DB: A0A059ZKS3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	99.479	100	0.995