Detailed information NTG0941842

Bioinformatically predicted

Overview

• Name: rpoN/rpoN1
• Type: Machinery gene
• Locus tag: ABUS28_RS14555
• Genome accession: NZ_CP169866
• Coordinates: 3015247..3016695 (-)
• Length: 482 a.a.
• NCBI ID: WP_016654381.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain Rp779
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3010247..3021695

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABUS28_RS14530	hisD	3011009..3012298 (-)	1290	WP_025470731.1	histidinol dehydrogenase	-
ABUS28_RS14535	hisG	3012404..3013087 (-)	684	WP_001000724.1	ATP phosphoribosyltransferase	-
ABUS28_RS14540	murA	3013087..3014343 (-)	1257	WP_000357156.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
ABUS28_RS14545	ibaG	3014350..3014601 (-)	252	WP_001083681.1	BolA family iron metabolism protein IbaG	-
ABUS28_RS14550	hpf	3014740..3015078 (-)	339	WP_016654380.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
ABUS28_RS14555	rpoN/rpoN1	3015247..3016695 (-)	1449	WP_016654381.1	RNA polymerase factor sigma-54	Machinery gene

Sequence

Protein

• Length: 482 a.a.
• Molecular weight: 55064.93 Da
• Isoelectric Point: 4.6620

>NTDB_id=941842 ABUS28_RS14555 WP_016654381.1 3015247..3016695(-) (rpoN/rpoN1) [Acinetobacter baumannii strain Rp779]
MKLSVGLKVANSLSLTPQLQQAIRLLQLSSLELEQEIQIQLDSNPLLEKVEDESLAESLSTLEHKETDDLTTELNADHLP
DDLPVDTEWDDIYTHQSTALGTPEFEEREDNRQVHLTLKEHILEQVNLLHFSKIDQLIAYCIVDALDDKGFLDAELEEII
LAVQHLLSEMDIDEEVEEDEVLVVLKHIQRLDPIGIGARNLAECLKVQLEFLPRETEYLKEARSLLQYYELLIANDLNKL
LKQTGLSKEQLKFAVDLLKTLKPYPGMDFEKQESEYQIPDVVVAKKDLHWQVQLNPDVMPKLRINSFYSSMIRRADQSDD
NLYLRNQMLEAKNFIKSIDERHKTLLKVATCIVEHQKAFLEIGPEAMKPLVLRDVAEEVELHESTVSRVTTNKYILTPRG
LFELKYFFSSHVGTTTGGEASSTAIRAMIKKLVSNENPRKPLSDNAIAALLKEEGIEVARRTVAKYRESLHIPSSSERKV
LI

Nucleotide

• Length: 1449 bp

>NTDB_id=941842 ABUS28_RS14555 WP_016654381.1 3015247..3016695(-) (rpoN/rpoN1) [Acinetobacter baumannii strain Rp779]
ATGAAATTATCTGTTGGATTGAAAGTTGCGAATTCATTATCGTTAACGCCTCAATTGCAGCAGGCAATCCGTTTACTACA
ACTTTCTAGCCTAGAGTTAGAGCAAGAAATCCAAATTCAATTAGATAGTAATCCATTACTTGAAAAAGTAGAAGATGAAT
CACTAGCAGAAAGTTTATCTACTTTAGAACACAAAGAAACTGATGATCTTACAACAGAGTTAAATGCTGATCACTTACCT
GATGACTTGCCTGTTGATACTGAATGGGATGACATTTATACACATCAATCCACTGCTTTGGGTACTCCTGAGTTCGAAGA
GCGTGAAGATAATCGCCAAGTTCACCTGACGCTTAAAGAACATATTTTGGAGCAAGTGAACTTACTACATTTTTCAAAAA
TAGATCAGTTGATTGCTTATTGCATAGTTGATGCTTTAGATGATAAAGGTTTTCTGGATGCTGAATTAGAAGAGATTATT
TTGGCAGTACAGCATTTATTAAGTGAGATGGATATAGATGAGGAAGTGGAAGAGGATGAAGTTTTAGTAGTCTTAAAACA
TATTCAACGTCTTGATCCAATTGGTATTGGAGCTCGTAATTTAGCTGAATGTTTAAAAGTTCAGTTGGAGTTCTTGCCTC
GAGAAACTGAATATTTGAAAGAAGCTAGAAGTCTACTTCAATATTACGAATTACTGATTGCGAATGATCTTAATAAACTA
TTAAAACAAACAGGGCTTTCTAAGGAACAGTTAAAATTTGCAGTTGATTTATTAAAAACATTAAAGCCTTATCCAGGCAT
GGATTTTGAAAAGCAAGAATCAGAATATCAAATTCCTGACGTAGTCGTTGCCAAGAAGGACTTGCATTGGCAAGTTCAGT
TAAATCCTGATGTAATGCCAAAATTAAGAATCAATTCTTTTTATTCGAGTATGATTCGTAGAGCAGATCAAAGTGATGAT
AATTTATATCTACGTAATCAAATGCTTGAGGCTAAAAATTTTATAAAAAGTATTGATGAACGACACAAAACATTATTGAA
AGTTGCGACTTGTATTGTTGAGCATCAAAAAGCATTTCTTGAAATAGGTCCCGAAGCAATGAAACCCTTAGTACTAAGGG
ATGTTGCAGAAGAAGTAGAATTACATGAGTCGACCGTTTCTCGCGTTACCACAAATAAGTATATACTTACTCCACGTGGA
CTTTTTGAGTTGAAATACTTCTTTTCTAGTCATGTGGGGACAACCACAGGAGGTGAGGCTTCTTCTACCGCAATTCGGGC
AATGATTAAAAAGTTAGTTTCTAATGAAAATCCGCGTAAACCTTTGTCTGATAATGCAATTGCTGCTTTATTGAAAGAGG
AGGGAATAGAAGTAGCTAGAAGGACTGTAGCAAAATATAGAGAATCGTTACATATTCCATCGTCATCCGAGAGAAAAGTC
TTGATCTAA

Domains

Predicted by InterProScan.

• Sigma-54 factor, core binding domain (Sigma54_CBD) (111-308)

• Sigma-54, DNA binding domain (Sigma54_DBD) (323-479)

• Sigma-54 factor, Activator interacting domain (AID) (Sigma54_AID) (7-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoN/rpoN1	Ralstonia pseudosolanacearum GMI1000	43.137	100	0.456