Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | V6985_RS17170 | Genome accession | NZ_CP146071 |
| Coordinates | 3738899..3739219 (+) | Length | 106 a.a. |
| NCBI ID | WP_021140625.1 | Uniprot ID | T0QN50 |
| Organism | Aeromonas salmonicida strain GMT3 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3733899..3744219
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V6985_RS17145 (V6985_17150) | trhA | 3734525..3735160 (-) | 636 | WP_021140622.1 | PAQR family membrane homeostasis protein TrhA | - |
| V6985_RS17150 (V6985_17155) | - | 3735385..3736920 (+) | 1536 | WP_409011294.1 | pyridoxal-dependent decarboxylase | - |
| V6985_RS17155 (V6985_17160) | - | 3737006..3737557 (+) | 552 | WP_005318063.1 | septation protein A | - |
| V6985_RS17160 (V6985_17165) | - | 3737584..3737880 (+) | 297 | WP_059114085.1 | YciI family protein | - |
| V6985_RS17165 (V6985_17170) | cysQ | 3737962..3738732 (-) | 771 | WP_409011295.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| V6985_RS17170 (V6985_17175) | comEA | 3738899..3739219 (+) | 321 | WP_021140625.1 | ComEA family DNA-binding protein | Machinery gene |
| V6985_RS17175 (V6985_17180) | galU | 3739314..3740225 (+) | 912 | WP_021140626.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| V6985_RS17180 (V6985_17185) | - | 3740439..3741836 (+) | 1398 | WP_265420831.1 | peptide MFS transporter | - |
| V6985_RS17185 (V6985_17190) | - | 3741912..3742883 (-) | 972 | WP_265434679.1 | response regulator | - |
| V6985_RS17190 (V6985_17195) | - | 3742979..3743443 (-) | 465 | WP_197665895.1 | response regulator | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11211.08 Da Isoelectric Point: 9.6863
>NTDB_id=941553 V6985_RS17170 WP_021140625.1 3738899..3739219(+) (comEA) [Aeromonas salmonicida strain GMT3]
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVTTAKESGKVNLNTASINELTALKGIGEKKAQAIVDFREKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVTTAKESGKVNLNTASINELTALKGIGEKKAQAIVDFREKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=941553 V6985_RS17170 WP_021140625.1 3738899..3739219(+) (comEA) [Aeromonas salmonicida strain GMT3]
ATGAACTACAAGACCCTGACCGCCACCCTGCTACTGAGCTGCCTGCCCCTGTTGAGCCAGCCTTTGCTGGCCGCCGACAA
GCCGGCTGCCAAGCCAGCGACCACGGTCACCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACGGCCAGTATCAATG
AGTTAACTGCTCTCAAGGGGATCGGAGAGAAGAAGGCGCAGGCCATCGTCGATTTTCGTGAGAAGCAGGGCAAGTTCACC
ACGGTTGAACAACTGGCGGATGTCAGCGGCATAGGGCCGGCAACCCTGGAAGCAAATCGGGACATGATCATCGTCAAATA
G
ATGAACTACAAGACCCTGACCGCCACCCTGCTACTGAGCTGCCTGCCCCTGTTGAGCCAGCCTTTGCTGGCCGCCGACAA
GCCGGCTGCCAAGCCAGCGACCACGGTCACCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACGGCCAGTATCAATG
AGTTAACTGCTCTCAAGGGGATCGGAGAGAAGAAGGCGCAGGCCATCGTCGATTTTCGTGAGAAGCAGGGCAAGTTCACC
ACGGTTGAACAACTGGCGGATGTCAGCGGCATAGGGCCGGCAACCCTGGAAGCAAATCGGGACATGATCATCGTCAAATA
G
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae strain A1552 |
51.818 |
100 |
0.538 |
| comEA | Vibrio cholerae C6706 |
51.818 |
100 |
0.538 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
44.144 |
100 |
0.462 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
46.392 |
91.509 |
0.425 |
| comEA | Legionella pneumophila str. Paris |
41.837 |
92.453 |
0.387 |
| comEA | Legionella pneumophila strain ERS1305867 |
41.837 |
92.453 |
0.387 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
63.492 |
59.434 |
0.377 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
51.316 |
71.698 |
0.368 |