Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   R8574_RS07495 Genome accession   NZ_AP028385
Coordinates   1439022..1439990 (+) Length   322 a.a.
NCBI ID   WP_070306993.1    Uniprot ID   -
Organism   Campylobacter jejuni strain BCH-11320     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1434022..1444990
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R8574_RS07470 (B11320_14930) cdsA 1434932..1435657 (-) 726 WP_057033757.1 phosphatidate cytidylyltransferase -
  R8574_RS07475 (B11320_14940) - 1435666..1436004 (-) 339 WP_002852397.1 hypothetical protein -
  R8574_RS07480 (B11320_14950) - 1436006..1437313 (-) 1308 WP_002864240.1 NFACT RNA binding domain-containing protein -
  R8574_RS07485 (B11320_14960) mobA 1437375..1437950 (+) 576 WP_002867312.1 molybdenum cofactor guanylyltransferase -
  R8574_RS07490 (B11320_14970) pldA 1437947..1438936 (+) 990 WP_032590534.1 phospholipase A -
  R8574_RS07495 (B11320_14980) ceuB 1439022..1439990 (+) 969 WP_070306993.1 ABC transporter permease Machinery gene
  R8574_RS07500 (B11320_14990) ceuC 1439983..1440921 (+) 939 WP_070306994.1 iron chelate uptake ABC transporter family permease subunit -
  R8574_RS07505 (B11320_15000) ceuD 1440918..1441676 (+) 759 WP_317647612.1 ABC transporter ATP-binding protein -
  R8574_RS07510 (B11320_15010) ceuB 1441689..1442680 (+) 992 Protein_1459 enterochelin ABC transporter substrate-binding protein CeuB -
  R8574_RS07520 (B11320_15030) - 1442906..1443460 (-) 555 WP_002884169.1 membrane protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35445.34 Da        Isoelectric Point: 9.6678

>NTDB_id=94155 R8574_RS07495 WP_070306993.1 1439022..1439990(+) (ceuB) [Campylobacter jejuni strain BCH-11320]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFAGASFFTQAIIASIFAFLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKA
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=94155 R8574_RS07495 WP_070306993.1 1439022..1439990(+) (ceuB) [Campylobacter jejuni strain BCH-11320]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACCCTCACAAGAATTCCTA
GACTTATAGCGATTTTACTCACAGGAATGAGTCTTAGTATATGCGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCTCCAACTACAGCAGGAACTATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTGCTGGAGCGTC
TTTTTTTACTCAAGCTATCATTGCTTCTATATTTGCATTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGCATTATTAGTGCTATAACTACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGCTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
ACTTTACATTTCTTTGCCACTTTTTATACTTGCTTATTTTTTAGCTCACAAAATCACCATAGTTGGCATGGGCGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGGATATTATTTTTAGGCTTGATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGAATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTGCTTGTTTGCGATATCATTTCAAGACTTGTCATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGCT
TATGCGTAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.379

100

0.994

Multiple sequence alignment