Detailed information NTG0941518

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: V1210_RS06345
• Genome accession: NZ_CP146066
• Coordinates: 1250247..1251221 (+)
• Length: 324 a.a.
• NCBI ID: WP_107612067.1
• Uniprot ID: -
• Organism: Staphylococcus haemolyticus strain SCT27
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1245247..1256221

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V1210_RS06310 (V1210_06310)	rpmG	1245680..1245829 (+)	150	WP_011275661.1	50S ribosomal protein L33	-
V1210_RS06315 (V1210_06315)	-	1246065..1246601 (+)	537	WP_317955335.1	5-formyltetrahydrofolate cyclo-ligase	-
V1210_RS06320 (V1210_06320)	-	1246617..1248074 (+)	1458	WP_317955337.1	rhomboid family intramembrane serine protease	-
V1210_RS06325 (V1210_06325)	-	1248058..1248261 (+)	204	WP_037536577.1	YqgQ family protein	-
V1210_RS06330 (V1210_06330)	-	1248258..1249244 (+)	987	WP_107612069.1	ROK family glucokinase	-
V1210_RS06335 (V1210_06335)	-	1249244..1249567 (+)	324	WP_011275666.1	MTH1187 family thiamine-binding protein	-
V1210_RS06340 (V1210_06340)	-	1249569..1250195 (+)	627	WP_317955339.1	MBL fold metallo-hydrolase	-
V1210_RS06345 (V1210_06345)	comGA	1250247..1251221 (+)	975	WP_107612067.1	competence type IV pilus ATPase ComGA	Machinery gene
V1210_RS06350 (V1210_06350)	comGB	1251193..1252257 (+)	1065	WP_233641399.1	competence type IV pilus assembly protein ComGB	-
V1210_RS06355 (V1210_06355)	comGC	1252271..1252591 (+)	321	WP_107614543.1	competence type IV pilus major pilin ComGC	Machinery gene
V1210_RS06360 (V1210_06360)	comGD	1252656..1253024 (+)	369	WP_326007647.1	competence type IV pilus minor pilin ComGD	-
V1210_RS06365 (V1210_06365)	-	1253872..1254390 (+)	519	WP_326007649.1	shikimate kinase	-
V1210_RS06370 (V1210_06370)	gcvT	1254579..1255670 (+)	1092	WP_037536557.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37164.13 Da
• Isoelectric Point: 8.2232

>NTDB_id=941518 V1210_RS06345 WP_107612067.1 1250247..1251221(+) (comGA) [Staphylococcus haemolyticus strain SCT27]
MKLLFREIVNKAISKNASDIHFIPSVDEVHIKFRINDYLELYEIFNLDVYQKLLVFMKFKSGLDVSSQQSAQSGRYTYQS
KSTFYLRISTLPLSLGIESCVIRIIPQYFQAKKEYKEFNDFKHLVNKKQGLILLTGPTGSGKSTLMYQMVLHAYKELNLN
VITIENPVEQLLKGITQISINKKAGIDYISSFKAILRCDPDIILIGEIRDAEVAKCVIQASLSGHLVLSTMHSTNCRGAL
LRLLEMGISIQELTQSINIISNQRLITTTQNERRLICETIDKMQIQYFFEHEQTMPHNFNNLEQQLNLLSKEGTICEDTA
SKYF

Nucleotide

• Length: 975 bp

>NTDB_id=941518 V1210_RS06345 WP_107612067.1 1250247..1251221(+) (comGA) [Staphylococcus haemolyticus strain SCT27]
TTGAAACTATTATTCAGAGAGATAGTTAATAAAGCTATTTCAAAAAATGCGAGCGACATACATTTTATCCCTTCAGTTGA
TGAAGTTCATATTAAATTTAGAATTAATGATTACCTTGAACTTTATGAAATATTCAACTTAGATGTATATCAAAAATTAT
TAGTATTTATGAAGTTCAAATCAGGCTTGGACGTTTCATCTCAACAATCCGCTCAAAGTGGTCGTTATACTTATCAATCT
AAATCTACTTTTTATTTACGGATTTCAACATTACCTTTATCTTTAGGTATAGAAAGTTGTGTAATTAGGATAATTCCTCA
ATATTTTCAAGCAAAAAAAGAATATAAAGAATTTAATGATTTTAAACACTTAGTAAATAAAAAGCAGGGATTAATTCTAT
TAACTGGACCCACAGGATCCGGCAAAAGTACTCTAATGTATCAAATGGTTCTACACGCATATAAAGAATTAAATCTTAAT
GTTATCACTATCGAAAACCCAGTTGAGCAATTACTAAAAGGCATTACCCAAATATCAATAAATAAAAAGGCAGGTATAGA
CTACATAAGTTCATTTAAAGCTATATTAAGATGTGATCCTGATATTATTTTAATAGGTGAAATAAGAGACGCAGAAGTTG
CTAAATGTGTTATTCAAGCTAGTTTGAGTGGACATCTTGTATTATCAACCATGCATTCTACTAATTGTAGAGGTGCATTA
CTTCGGTTACTTGAGATGGGAATTTCAATTCAAGAATTAACACAATCTATCAATATCATTTCTAATCAAAGATTAATAAC
GACTACTCAGAATGAGCGTCGCTTAATTTGTGAAACAATAGATAAAATGCAGATACAATATTTCTTCGAGCATGAACAAA
CAATGCCACATAATTTTAATAATTTAGAACAGCAATTAAATTTATTATCTAAAGAAGGAACAATTTGTGAAGATACTGCA
AGTAAATATTTTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (8-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	65.944	99.691	0.657
comGA	Staphylococcus aureus N315	65.944	99.691	0.657