Detailed information NTG0941496

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: V1211_RS10755
• Genome accession: NZ_CP146065
• Coordinates: 2152242..2153606 (-)
• Length: 454 a.a.
• NCBI ID: WP_011276735.1
• Uniprot ID: A0A2A1KAD2
• Organism: Staphylococcus haemolyticus strain SPS12
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2147242..2158606

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V1211_RS10740 (V1211_10750)	cysE	2148166..2148795 (-)	630	WP_172458793.1	serine O-acetyltransferase	-
V1211_RS10745 (V1211_10755)	gltX	2149250..2150704 (-)	1455	WP_016931336.1	glutamate--tRNA ligase	-
V1211_RS10750 (V1211_10760)	-	2151149..2152216 (-)	1068	WP_107612366.1	PIN/TRAM domain-containing protein	-
V1211_RS10755 (V1211_10765)	radA	2152242..2153606 (-)	1365	WP_011276735.1	DNA repair protein RadA	Machinery gene
V1211_RS10760 (V1211_10770)	-	2153738..2155064 (-)	1327	Protein_2085	transposase	-
V1211_RS10765 (V1211_10775)	-	2155363..2157837 (-)	2475	WP_016931338.1	ATP-dependent Clp protease ATP-binding subunit	-

Sequence

Protein

• Length: 454 a.a.
• Molecular weight: 49851.15 Da
• Isoelectric Point: 7.0044

>NTDB_id=941496 V1211_RS10755 WP_011276735.1 2152242..2153606(-) (radA) [Staphylococcus haemolyticus strain SPS12]
MAKKKVIFECMACGYQSPKWMGKCPNCGSWNQMEEIVEKASNPKHGVKTSTSSAKVQKLNDIKNEVTPRVQTESKEFNRV
LGGGIVSGSLVLIGGDPGIGKSTLLLQICASLSQKLNVLYITGEESLNQTKLRADRLDEDSSNLNVLAETDLEVIHQTVQ
QAQPDILVVDSIQTIYHPEISSAPGSVSQVRESTQSLMNIAKQMNIATFIVGHVTKEGQIAGPRLLEHMVDTVLYFEGDE
HHAYRILRAVKNRFGSTNEMGIFEMKQSGLKGVHNPSEMFLEERSTNVPGSTIVATMEGTRPLLIEVQALVTPTTFNNPR
RMATGIDHNRLSLLMAVLEKKENYLLQQQDAYIKVAGGVRLTEPAVDLSVIVATASSFKDKAVDGLDCYIGEVGLTGEVR
RVSRIEQRVQEAAKLGFERVIIPQTNIGGWQFPEGIKVVGVSTVHDALKYAFKS

Nucleotide

• Length: 1365 bp

>NTDB_id=941496 V1211_RS10755 WP_011276735.1 2152242..2153606(-) (radA) [Staphylococcus haemolyticus strain SPS12]
TTGGCCAAAAAGAAAGTAATTTTTGAGTGTATGGCTTGCGGCTATCAATCTCCAAAATGGATGGGAAAGTGTCCTAATTG
TGGGTCATGGAATCAAATGGAGGAAATTGTTGAAAAAGCTTCAAATCCTAAACACGGCGTAAAGACATCAACGTCTAGCG
CAAAAGTCCAGAAATTAAATGATATCAAGAATGAAGTGACACCGAGAGTTCAGACAGAATCAAAAGAGTTCAACCGCGTT
TTAGGCGGTGGCATTGTAAGTGGTTCTTTAGTGTTAATAGGTGGAGATCCTGGTATTGGTAAATCAACGTTATTACTGCA
AATTTGTGCATCATTGTCACAAAAATTAAATGTACTGTATATTACAGGTGAAGAATCACTAAATCAAACTAAATTACGTG
CCGATCGACTAGATGAAGATTCGAGTAATTTAAATGTGTTAGCAGAAACAGATTTAGAGGTAATACATCAAACAGTTCAG
CAAGCACAACCTGATATTTTAGTTGTGGATTCTATTCAAACAATATATCATCCTGAAATTAGTTCGGCACCTGGTTCTGT
GTCTCAAGTTAGAGAGAGTACACAGAGTTTAATGAATATTGCTAAACAAATGAATATTGCAACATTTATCGTCGGACATG
TTACAAAAGAAGGTCAAATTGCAGGACCGCGTCTATTAGAACATATGGTTGATACTGTACTGTACTTTGAGGGAGATGAG
CATCATGCTTATCGTATCTTGAGAGCGGTTAAGAACCGTTTTGGTTCTACTAATGAAATGGGCATTTTTGAAATGAAACA
AAGCGGATTAAAAGGCGTTCATAATCCTTCTGAAATGTTCTTAGAGGAACGTTCTACCAATGTACCGGGATCAACGATTG
TAGCAACTATGGAAGGCACACGACCTCTATTAATAGAAGTTCAGGCCTTAGTGACTCCTACAACATTTAATAACCCTAGA
CGTATGGCAACAGGTATAGATCATAATCGTTTGAGTTTATTAATGGCTGTATTAGAGAAAAAAGAAAACTATTTATTACA
ACAACAAGATGCATATATTAAAGTAGCTGGTGGCGTTCGATTGACAGAGCCGGCAGTTGATTTAAGTGTTATAGTAGCAA
CAGCTTCAAGTTTTAAAGATAAAGCAGTAGATGGGCTTGATTGTTATATTGGAGAAGTAGGTTTGACCGGTGAAGTGAGA
CGTGTTTCTCGAATTGAACAACGTGTTCAAGAAGCAGCTAAATTAGGCTTTGAACGCGTTATTATTCCACAGACAAATAT
CGGTGGGTGGCAATTTCCTGAAGGCATTAAAGTAGTAGGAGTGTCTACAGTACATGATGCACTAAAATATGCATTCAAAT
CGTAA

Domains

Predicted by InterProScan.

• AAA domain (AAA_25) (67-218)

• Subunit ChlI of Mg-chelatase (ChlI) (359-426)

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (8-35)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Bacillus subtilis subsp. subtilis str. 168	65.427	100	0.659
radA	Streptococcus pneumoniae Rx1	60.177	99.559	0.599
radA	Streptococcus pneumoniae D39	60.177	99.559	0.599
radA	Streptococcus pneumoniae R6	60.177	99.559	0.599
radA	Streptococcus pneumoniae TIGR4	60.177	99.559	0.599
radA	Streptococcus mitis NCTC 12261	60.177	99.559	0.599
radA	Streptococcus mitis SK321	60.177	99.559	0.599