Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   V6K67_RS09185 Genome accession   NZ_CP145941
Coordinates   1772106..1773182 (-) Length   358 a.a.
NCBI ID   WP_011226464.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain TCI633     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1767106..1778182
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6K67_RS09165 (V6K67_09165) - 1768218..1770284 (-) 2067 WP_011227498.1 sodium:proton antiporter -
  V6K67_RS09170 (V6K67_09170) - 1770293..1770535 (-) 243 WP_011227499.1 hypothetical protein -
  V6K67_RS09175 (V6K67_09175) - 1770532..1771080 (-) 549 WP_004197152.1 class I SAM-dependent methyltransferase -
  V6K67_RS09180 (V6K67_09180) - 1771077..1772021 (-) 945 WP_011226463.1 TIGR01212 family radical SAM protein -
  V6K67_RS09185 (V6K67_09185) sepM 1772106..1773182 (-) 1077 WP_011226464.1 SepM family pheromone-processing serine protease Regulator
  V6K67_RS09190 (V6K67_09190) coaD 1773160..1773657 (-) 498 WP_011226465.1 pantetheine-phosphate adenylyltransferase -
  V6K67_RS09195 (V6K67_09195) rsmD 1773691..1774290 (-) 600 WP_011227500.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  V6K67_RS09200 (V6K67_09200) trxB 1774381..1775334 (-) 954 WP_255136104.1 thioredoxin-disulfide reductase -
  V6K67_RS09205 (V6K67_09205) - 1775367..1775591 (-) 225 WP_011226468.1 DUF4059 family protein -
  V6K67_RS09210 (V6K67_09210) - 1775806..1776549 (-) 744 WP_011226469.1 amino acid ABC transporter ATP-binding protein -
  V6K67_RS09215 (V6K67_09215) - 1776549..1777295 (-) 747 WP_095559509.1 amino acid ABC transporter permease -

Sequence


Protein


Download         Length: 358 a.a.        Molecular weight: 39232.11 Da        Isoelectric Point: 9.4944

>NTDB_id=941277 V6K67_RS09185 WP_011226464.1 1772106..1773182(-) (sepM) [Streptococcus thermophilus strain TCI633]
MANKTKSKSLLEKMWRIKWWLLSIFTVLFLLFALFFPLNNYYVELPGGAFDTKEVLTVNKKADDSKGSYNFVAVAQTKAT
LALMLYTQFNDFAKLQTAEEATGNYSDEDFMRINQFYMETSQNQAVYQGLTLAGKEVSLEYMGVYVLQVADDSSFKGVLN
IADTVTAVNGKTFDNSTDMIKYVQGLKLGSKVKVTYMRDGKEKTATGKIIKIANGKNGIGIGLTDHTEIKSPENVKFKLD
GVGGPSAGLMFTLAIYDQVSGQDLKAGRKIAGTGTIEKDGAVGDIGGAYLKVKSAADSGADIFFVPNNLVTKEMKKADPD
AKTNYQEAKEAAEKLGTKMKIVPVKTAQEAIDYLKKTK

Nucleotide


Download         Length: 1077 bp        

>NTDB_id=941277 V6K67_RS09185 WP_011226464.1 1772106..1773182(-) (sepM) [Streptococcus thermophilus strain TCI633]
GTGGCAAACAAGACAAAATCTAAATCGCTATTAGAGAAAATGTGGCGTATTAAGTGGTGGTTATTAAGTATTTTTACGGT
ACTTTTCCTCCTTTTTGCCCTCTTTTTCCCGCTCAATAATTACTATGTGGAGCTTCCGGGTGGTGCTTTTGATACCAAGG
AAGTCTTGACAGTGAATAAGAAAGCTGATGATTCTAAGGGCTCCTATAATTTTGTGGCGGTGGCTCAAACCAAGGCGACT
TTGGCCTTGATGCTCTATACTCAGTTTAATGATTTTGCAAAGCTTCAAACGGCTGAAGAGGCAACTGGAAATTACTCTGA
TGAAGATTTCATGCGCATCAACCAATTTTACATGGAGACTTCTCAAAACCAAGCGGTTTATCAGGGCTTGACTCTGGCTG
GTAAGGAGGTTAGTTTGGAGTATATGGGTGTCTATGTGCTTCAGGTTGCTGATGATTCTAGCTTCAAGGGTGTCCTCAAT
ATTGCTGATACGGTGACGGCTGTTAATGGTAAGACCTTTGATAATTCTACTGACATGATTAAATACGTTCAAGGACTTAA
GCTGGGTTCAAAGGTCAAGGTCACTTATATGAGAGATGGCAAAGAAAAGACTGCTACTGGTAAGATTATTAAGATTGCCA
ATGGCAAAAATGGTATTGGTATCGGCCTAACGGACCATACTGAGATCAAGAGTCCTGAGAATGTTAAGTTTAAACTGGAT
GGTGTCGGTGGGCCAAGTGCTGGTCTTATGTTTACCTTGGCTATTTACGATCAGGTGTCTGGTCAAGACCTCAAGGCTGG
CCGCAAGATTGCTGGTACAGGAACTATTGAAAAAGATGGGGCTGTCGGTGATATCGGTGGGGCCTATCTCAAGGTGAAAT
CTGCGGCTGATAGTGGCGCAGACATTTTCTTCGTGCCAAATAATCTAGTAACTAAGGAAATGAAAAAGGCTGATCCGGAT
GCCAAGACTAATTATCAAGAGGCCAAGGAAGCTGCCGAGAAACTGGGGACCAAGATGAAAATCGTCCCTGTTAAAACAGC
TCAAGAAGCCATTGATTATTTGAAAAAGACTAAATGA

Domains


Predicted by InterproScan.

(137-206)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

62.757

95.251

0.598