Detailed information
Bioinformatically predicted
Overview
| Name | priA | Type | Machinery gene |
| Locus tag | V5M36_RS14010 | Genome accession | NZ_CP145906 |
| Coordinates | 3086293..3088515 (+) | Length | 740 a.a. |
| NCBI ID | WP_338560091.1 | Uniprot ID | - |
| Organism | Acinetobacter sp. KS-LM10 | ||
| Function | DNA puliing through the inner membrane (predicted from homology) DNA binding and uptake |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 3088666..3131933 | 3086293..3088515 | flank | 151 |
Gene organization within MGE regions
Location: 3086293..3131933
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V5M36_RS14010 (V5M36_14010) | priA | 3086293..3088515 (+) | 2223 | WP_338560091.1 | primosomal protein N' | Machinery gene |
| V5M36_RS14015 (V5M36_14015) | - | 3089017..3090897 (+) | 1881 | WP_338560093.1 | monovalent cation:proton antiporter-2 (CPA2) family protein | - |
| V5M36_RS14020 (V5M36_14020) | hslO | 3090948..3091823 (+) | 876 | WP_338560095.1 | Hsp33 family molecular chaperone HslO | - |
| V5M36_RS14025 (V5M36_14025) | - | 3092134..3093084 (+) | 951 | WP_338560097.1 | J domain-containing protein | - |
| V5M36_RS14030 (V5M36_14030) | - | 3093097..3093435 (+) | 339 | WP_338560099.1 | chaperone modulator CbpM | - |
| V5M36_RS14035 (V5M36_14035) | - | 3093577..3093831 (+) | 255 | WP_338560101.1 | DUF465 domain-containing protein | - |
| V5M36_RS14040 (V5M36_14040) | - | 3093856..3095079 (-) | 1224 | WP_338560104.1 | magnesium transporter CorA family protein | - |
| V5M36_RS14045 (V5M36_14045) | pnp | 3095171..3097264 (-) | 2094 | WP_338564242.1 | polyribonucleotide nucleotidyltransferase | - |
| V5M36_RS14050 (V5M36_14050) | rpsO | 3097529..3097798 (-) | 270 | WP_338560106.1 | 30S ribosomal protein S15 | - |
| V5M36_RS14055 (V5M36_14055) | - | 3098050..3099348 (+) | 1299 | WP_338560108.1 | serine hydrolase domain-containing protein | - |
| V5M36_RS14060 (V5M36_14060) | recD | 3099914..3101644 (-) | 1731 | WP_338564244.1 | exodeoxyribonuclease V subunit alpha | - |
| V5M36_RS14065 (V5M36_14065) | - | 3101795..3105502 (-) | 3708 | WP_338560110.1 | UvrD-helicase domain-containing protein | - |
| V5M36_RS14070 (V5M36_14070) | - | 3105506..3109258 (-) | 3753 | WP_338560112.1 | exodeoxyribonuclease V subunit gamma | - |
| V5M36_RS14075 (V5M36_14075) | - | 3109450..3109956 (+) | 507 | WP_338560114.1 | hypothetical protein | - |
| V5M36_RS14080 (V5M36_14080) | - | 3110104..3111537 (-) | 1434 | WP_338564246.1 | phosphate--AMP phosphotransferase | - |
| V5M36_RS14085 (V5M36_14085) | - | 3111913..3112620 (+) | 708 | WP_338560116.1 | hypothetical protein | - |
| V5M36_RS14090 (V5M36_14090) | ubiE | 3112894..3113838 (+) | 945 | WP_338560117.1 | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | - |
| V5M36_RS14095 (V5M36_14095) | - | 3113860..3114516 (+) | 657 | WP_338560120.1 | hypothetical protein | - |
| V5M36_RS14100 (V5M36_14100) | - | 3114535..3116154 (+) | 1620 | WP_338560123.1 | AarF/UbiB family protein | - |
| V5M36_RS14105 (V5M36_14105) | - | 3116278..3116463 (+) | 186 | WP_338560124.1 | helix-turn-helix domain-containing protein | - |
| V5M36_RS14110 (V5M36_14110) | - | 3116617..3117228 (+) | 612 | WP_338560127.1 | IS30 family transposase | - |
| V5M36_RS14115 (V5M36_14115) | pgsA | 3117418..3118002 (-) | 585 | WP_338560129.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| V5M36_RS14120 (V5M36_14120) | - | 3118106..3118903 (-) | 798 | WP_338560132.1 | thioesterase family protein | - |
| V5M36_RS14125 (V5M36_14125) | - | 3119031..3119351 (-) | 321 | WP_338560134.1 | DOPA 4,5-dioxygenase family protein | - |
| V5M36_RS14130 (V5M36_14130) | uvrC | 3119431..3121230 (-) | 1800 | WP_338560136.1 | excinuclease ABC subunit UvrC | - |
| V5M36_RS14135 (V5M36_14135) | - | 3121859..3122881 (-) | 1023 | WP_338560139.1 | hypothetical protein | - |
| V5M36_RS14140 (V5M36_14140) | fadB | 3123419..3125572 (+) | 2154 | WP_338560141.1 | fatty acid oxidation complex subunit alpha FadB | - |
| V5M36_RS14145 (V5M36_14145) | fadA | 3125585..3126757 (+) | 1173 | WP_338560143.1 | acetyl-CoA C-acyltransferase FadA | - |
| V5M36_RS14150 (V5M36_14150) | - | 3126943..3127794 (+) | 852 | WP_338560145.1 | hypothetical protein | - |
| V5M36_RS14155 (V5M36_14155) | - | 3128370..3128371 (-) | 2 | WP_338560147.1 | IS5 family transposase | - |
| V5M36_RS14160 (V5M36_14160) | - | 3128911..3129771 (+) | 861 | WP_338564248.1 | DUF4747 family protein | - |
| V5M36_RS14165 (V5M36_14165) | - | 3129775..3130245 (+) | 471 | WP_338560149.1 | hypothetical protein | - |
| V5M36_RS14170 (V5M36_14170) | - | 3130638..3130639 (-) | 2 | WP_338560151.1 | IS5 family transposase | - |
| V5M36_RS14175 (V5M36_14175) | - | 3131238..3131750 (-) | 513 | WP_338560153.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 740 a.a. Molecular weight: 84230.58 Da Isoelectric Point: 8.8177
>NTDB_id=941073 V5M36_RS14010 WP_338560091.1 3086293..3088515(+) (priA) [Acinetobacter sp. KS-LM10]
MTNIAELSQSIYRVRVAVPVHLYDCFDYKVSAEEYQKIEVGARVLVSFGRQNLVGIVTEKLALNAPIDPRFQLKHITELL
DDQPIINDTVLKLVRWAAQYYQFPLGEVMHAALPALLRQGKPYNLLARTWRVLDTQAEAKLKRSLKQQEAYKILSLHPLG
TAETILNLSGIETSTLKAIEKKGLIRCELEAQNFLPEPVQLAQMPLTANPEQKNAIQTILKNTQKYHAFLLDGLTGSGKT
EVYLQVMHEVLKQGKQVLVLVPEIGLTPQTISRFQSRFHCNIVLLHSGLNESKRLQAWQYAQTGKASIILGTRSAIYTPM
PNLGLIILDEEHDLSFKQQEGFRYHARDVALYRAFLENCPVILGSATPSMDSFYLAEQGKLERIELNHRAAGASLPKMHL
IDLKIAKKQHGISESLIKEIQVRLDKKEQVLIFLNRRGYAPVLICESCAWQANCPHCDAHFTLHKKPYEHLHCHHCGTIN
RLPDACPQCNQPNLKPIGMGTAKVEESLNELFPEHKVIRVDRDSTSRVGSWQKIYDQIHTSEPMILLGTQMLAKGHHFPY
VTLVAILDIDSGLLSVDFRATERTAQLIIQVAGRAGRGEKKGEVYLQTLRPDHPLLNTLIQKNYRTFAKETLRDRQAALL
PPCRYAVLLRCESKNQDDNQKFLTEMTQMLRQHTENLIDIWGPIPAPMERKAGRYQAHVVLLSTDRAKMHFYIREWWQNV
LHYKPSGMKVTIDVDPQELS
MTNIAELSQSIYRVRVAVPVHLYDCFDYKVSAEEYQKIEVGARVLVSFGRQNLVGIVTEKLALNAPIDPRFQLKHITELL
DDQPIINDTVLKLVRWAAQYYQFPLGEVMHAALPALLRQGKPYNLLARTWRVLDTQAEAKLKRSLKQQEAYKILSLHPLG
TAETILNLSGIETSTLKAIEKKGLIRCELEAQNFLPEPVQLAQMPLTANPEQKNAIQTILKNTQKYHAFLLDGLTGSGKT
EVYLQVMHEVLKQGKQVLVLVPEIGLTPQTISRFQSRFHCNIVLLHSGLNESKRLQAWQYAQTGKASIILGTRSAIYTPM
PNLGLIILDEEHDLSFKQQEGFRYHARDVALYRAFLENCPVILGSATPSMDSFYLAEQGKLERIELNHRAAGASLPKMHL
IDLKIAKKQHGISESLIKEIQVRLDKKEQVLIFLNRRGYAPVLICESCAWQANCPHCDAHFTLHKKPYEHLHCHHCGTIN
RLPDACPQCNQPNLKPIGMGTAKVEESLNELFPEHKVIRVDRDSTSRVGSWQKIYDQIHTSEPMILLGTQMLAKGHHFPY
VTLVAILDIDSGLLSVDFRATERTAQLIIQVAGRAGRGEKKGEVYLQTLRPDHPLLNTLIQKNYRTFAKETLRDRQAALL
PPCRYAVLLRCESKNQDDNQKFLTEMTQMLRQHTENLIDIWGPIPAPMERKAGRYQAHVVLLSTDRAKMHFYIREWWQNV
LHYKPSGMKVTIDVDPQELS
Nucleotide
Download Length: 2223 bp
>NTDB_id=941073 V5M36_RS14010 WP_338560091.1 3086293..3088515(+) (priA) [Acinetobacter sp. KS-LM10]
ATGACAAATATTGCAGAATTAAGCCAATCCATCTACAGAGTGCGTGTTGCAGTACCTGTGCACCTATATGACTGTTTTGA
CTATAAAGTTTCTGCAGAAGAATATCAAAAGATTGAAGTCGGTGCTCGTGTCTTAGTGTCTTTTGGTCGTCAAAATTTAG
TAGGAATCGTCACAGAAAAACTGGCCTTAAACGCACCCATCGATCCTCGTTTTCAATTGAAGCATATTACTGAATTACTC
GATGATCAGCCGATTATCAATGATACGGTTTTAAAATTAGTTCGTTGGGCGGCTCAATATTATCAATTCCCCTTGGGTGA
GGTCATGCATGCAGCTTTACCTGCATTATTACGCCAAGGTAAACCGTATAATCTATTGGCGCGCACATGGAGAGTTTTAG
ACACTCAAGCAGAAGCCAAACTTAAACGCTCTCTCAAACAGCAAGAAGCGTATAAAATTTTAAGCTTACACCCCTTAGGC
ACAGCTGAAACAATTTTAAATTTAAGCGGTATTGAAACGTCAACGTTAAAGGCCATTGAAAAAAAAGGCCTCATACGCTG
TGAACTTGAGGCACAAAATTTCTTACCTGAACCTGTGCAATTGGCACAAATGCCATTAACCGCCAATCCAGAACAAAAAA
ATGCCATTCAGACTATTTTAAAAAATACTCAAAAATATCATGCTTTTTTATTGGATGGTCTGACGGGTAGTGGCAAGACC
GAAGTTTATTTACAGGTCATGCATGAGGTTTTAAAACAAGGTAAACAAGTTCTGGTCTTGGTTCCTGAAATTGGGTTAAC
GCCGCAAACGATCAGCCGCTTCCAGTCGCGTTTTCATTGCAATATTGTGTTATTGCATTCAGGCCTCAATGAAAGTAAAC
GCTTACAAGCGTGGCAATATGCACAAACAGGCAAAGCTTCGATTATTTTAGGTACGCGCTCTGCGATTTATACCCCAATG
CCGAATTTAGGCTTGATCATCTTAGATGAAGAACATGATCTCTCCTTTAAACAACAAGAAGGTTTCCGTTATCACGCAAG
AGATGTGGCCTTATATCGTGCATTTTTAGAAAATTGTCCTGTCATTTTAGGTTCAGCTACACCGAGTATGGATAGCTTTT
ATTTGGCAGAACAAGGCAAATTGGAACGGATTGAGCTCAATCACCGAGCAGCGGGCGCAAGTCTGCCAAAGATGCATCTG
ATTGATTTAAAAATTGCTAAAAAACAACATGGCATCAGTGAATCACTGATTAAAGAAATACAGGTTCGTTTAGATAAAAA
GGAACAAGTTTTAATCTTCCTCAATCGTCGGGGATATGCACCTGTTTTGATTTGTGAAAGCTGTGCGTGGCAGGCCAATT
GTCCTCATTGTGATGCCCATTTCACTTTGCACAAAAAACCGTATGAACATTTACACTGCCATCATTGCGGAACCATTAAT
CGCTTACCTGATGCATGTCCGCAATGTAATCAACCCAACCTAAAACCGATCGGAATGGGAACAGCCAAAGTTGAAGAAAG
CTTAAATGAGCTTTTTCCTGAACATAAAGTGATTCGAGTGGATCGCGACTCGACCAGTCGTGTAGGTAGTTGGCAAAAAA
TTTACGATCAGATTCATACTAGTGAACCGATGATTCTTTTGGGTACACAAATGTTGGCTAAAGGACATCATTTTCCGTAT
GTAACGCTTGTGGCCATTCTGGACATCGACTCTGGTCTACTCAGTGTTGATTTCCGTGCAACAGAGCGTACAGCACAATT
AATTATACAAGTGGCTGGACGTGCAGGTCGTGGTGAAAAGAAAGGTGAAGTCTACTTACAAACCCTAAGGCCCGATCATC
CATTACTTAATACATTAATTCAAAAAAATTATCGTACTTTCGCCAAAGAAACTTTACGAGATCGTCAAGCGGCATTATTG
CCTCCTTGCCGTTATGCTGTTTTATTACGTTGTGAATCTAAAAACCAAGATGATAATCAAAAGTTTTTGACTGAAATGAC
GCAAATGTTAAGACAACATACAGAAAATTTGATTGATATCTGGGGGCCTATTCCAGCCCCAATGGAGCGCAAAGCTGGAC
GCTATCAAGCGCATGTCGTTTTATTGTCTACCGACCGTGCCAAAATGCATTTCTATATTCGTGAATGGTGGCAAAACGTT
TTACATTACAAACCATCAGGCATGAAAGTCACCATCGATGTCGATCCGCAAGAGTTAAGTTAA
ATGACAAATATTGCAGAATTAAGCCAATCCATCTACAGAGTGCGTGTTGCAGTACCTGTGCACCTATATGACTGTTTTGA
CTATAAAGTTTCTGCAGAAGAATATCAAAAGATTGAAGTCGGTGCTCGTGTCTTAGTGTCTTTTGGTCGTCAAAATTTAG
TAGGAATCGTCACAGAAAAACTGGCCTTAAACGCACCCATCGATCCTCGTTTTCAATTGAAGCATATTACTGAATTACTC
GATGATCAGCCGATTATCAATGATACGGTTTTAAAATTAGTTCGTTGGGCGGCTCAATATTATCAATTCCCCTTGGGTGA
GGTCATGCATGCAGCTTTACCTGCATTATTACGCCAAGGTAAACCGTATAATCTATTGGCGCGCACATGGAGAGTTTTAG
ACACTCAAGCAGAAGCCAAACTTAAACGCTCTCTCAAACAGCAAGAAGCGTATAAAATTTTAAGCTTACACCCCTTAGGC
ACAGCTGAAACAATTTTAAATTTAAGCGGTATTGAAACGTCAACGTTAAAGGCCATTGAAAAAAAAGGCCTCATACGCTG
TGAACTTGAGGCACAAAATTTCTTACCTGAACCTGTGCAATTGGCACAAATGCCATTAACCGCCAATCCAGAACAAAAAA
ATGCCATTCAGACTATTTTAAAAAATACTCAAAAATATCATGCTTTTTTATTGGATGGTCTGACGGGTAGTGGCAAGACC
GAAGTTTATTTACAGGTCATGCATGAGGTTTTAAAACAAGGTAAACAAGTTCTGGTCTTGGTTCCTGAAATTGGGTTAAC
GCCGCAAACGATCAGCCGCTTCCAGTCGCGTTTTCATTGCAATATTGTGTTATTGCATTCAGGCCTCAATGAAAGTAAAC
GCTTACAAGCGTGGCAATATGCACAAACAGGCAAAGCTTCGATTATTTTAGGTACGCGCTCTGCGATTTATACCCCAATG
CCGAATTTAGGCTTGATCATCTTAGATGAAGAACATGATCTCTCCTTTAAACAACAAGAAGGTTTCCGTTATCACGCAAG
AGATGTGGCCTTATATCGTGCATTTTTAGAAAATTGTCCTGTCATTTTAGGTTCAGCTACACCGAGTATGGATAGCTTTT
ATTTGGCAGAACAAGGCAAATTGGAACGGATTGAGCTCAATCACCGAGCAGCGGGCGCAAGTCTGCCAAAGATGCATCTG
ATTGATTTAAAAATTGCTAAAAAACAACATGGCATCAGTGAATCACTGATTAAAGAAATACAGGTTCGTTTAGATAAAAA
GGAACAAGTTTTAATCTTCCTCAATCGTCGGGGATATGCACCTGTTTTGATTTGTGAAAGCTGTGCGTGGCAGGCCAATT
GTCCTCATTGTGATGCCCATTTCACTTTGCACAAAAAACCGTATGAACATTTACACTGCCATCATTGCGGAACCATTAAT
CGCTTACCTGATGCATGTCCGCAATGTAATCAACCCAACCTAAAACCGATCGGAATGGGAACAGCCAAAGTTGAAGAAAG
CTTAAATGAGCTTTTTCCTGAACATAAAGTGATTCGAGTGGATCGCGACTCGACCAGTCGTGTAGGTAGTTGGCAAAAAA
TTTACGATCAGATTCATACTAGTGAACCGATGATTCTTTTGGGTACACAAATGTTGGCTAAAGGACATCATTTTCCGTAT
GTAACGCTTGTGGCCATTCTGGACATCGACTCTGGTCTACTCAGTGTTGATTTCCGTGCAACAGAGCGTACAGCACAATT
AATTATACAAGTGGCTGGACGTGCAGGTCGTGGTGAAAAGAAAGGTGAAGTCTACTTACAAACCCTAAGGCCCGATCATC
CATTACTTAATACATTAATTCAAAAAAATTATCGTACTTTCGCCAAAGAAACTTTACGAGATCGTCAAGCGGCATTATTG
CCTCCTTGCCGTTATGCTGTTTTATTACGTTGTGAATCTAAAAACCAAGATGATAATCAAAAGTTTTTGACTGAAATGAC
GCAAATGTTAAGACAACATACAGAAAATTTGATTGATATCTGGGGGCCTATTCCAGCCCCAATGGAGCGCAAAGCTGGAC
GCTATCAAGCGCATGTCGTTTTATTGTCTACCGACCGTGCCAAAATGCATTTCTATATTCGTGAATGGTGGCAAAACGTT
TTACATTACAAACCATCAGGCATGAAAGTCACCATCGATGTCGATCCGCAAGAGTTAAGTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| priA | Acinetobacter baumannii D1279779 |
69.946 |
100 |
0.701 |