Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   V6U70_RS08195 Genome accession   NZ_CP145868
Coordinates   1800706..1801782 (-) Length   358 a.a.
NCBI ID   WP_048674793.1    Uniprot ID   A0AB35IU24
Organism   Streptococcus salivarius strain KSS12     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1795706..1806782
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U70_RS08170 (V6U70_08165) - 1795851..1796633 (+) 783 WP_014634965.1 ABC transporter ATP-binding protein -
  V6U70_RS08175 (V6U70_08170) - 1796817..1798883 (-) 2067 WP_048790211.1 cation:proton antiporter -
  V6U70_RS08180 (V6U70_08175) - 1798892..1799134 (-) 243 WP_014634967.1 hypothetical protein -
  V6U70_RS08185 (V6U70_08180) - 1799131..1799679 (-) 549 WP_014634968.1 tRNA (mnm(5)s(2)U34)-methyltransferase -
  V6U70_RS08190 (V6U70_08185) - 1799676..1800620 (-) 945 WP_004183328.1 TIGR01212 family radical SAM protein -
  V6U70_RS08195 (V6U70_08190) sepM 1800706..1801782 (-) 1077 WP_048674793.1 SepM family pheromone-processing serine protease Regulator
  V6U70_RS08200 (V6U70_08195) coaD 1801760..1802257 (-) 498 WP_048674796.1 pantetheine-phosphate adenylyltransferase -
  V6U70_RS08205 (V6U70_08200) rsmD 1802290..1802838 (-) 549 WP_230578921.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  V6U70_RS08210 (V6U70_08205) trxB 1802980..1803900 (-) 921 WP_002884706.1 thioredoxin-disulfide reductase -
  V6U70_RS08215 (V6U70_08210) - 1803966..1804190 (-) 225 WP_002884393.1 DUF4059 family protein -
  V6U70_RS08220 (V6U70_08215) - 1804402..1805145 (-) 744 WP_014634972.1 amino acid ABC transporter ATP-binding protein -
  V6U70_RS08225 (V6U70_08220) - 1805145..1805891 (-) 747 WP_101799852.1 amino acid ABC transporter permease -

Sequence


Protein


Download         Length: 358 a.a.        Molecular weight: 38987.68 Da        Isoelectric Point: 9.3844

>NTDB_id=940864 V6U70_RS08195 WP_048674793.1 1800706..1801782(-) (sepM) [Streptococcus salivarius strain KSS12]
MANKNESKSLLGKLWRIKWWLLSIFTVLFLLFALFFPLNNYYVELPGGAFDTKEVLTVDKKADDSKGSYNFVAVAQTKAT
LALMLYAQLNDFAKLQTAEEATGNYSDEDFMRINQFYMETSQNQAIYQGLTLAGKEASLEYMGVYVLQVADDSSFKGVLN
IADTVTAVNGKTFDNSADLIKYVQGLKLGSKVKVTYTTDDKEKTATGKIIKIANGKNGIGIGLTDHTEVKSPENVKFKLD
GVGGPSAGLMFTLAIYDQVSGQNLKAGRKIAGTGTIEKDGSVGDIGGAYLKVKSAADSGADIFFVPNNPVTKEMKKADPD
AKTNYQEAKEAAKKLGTKMKIVPVKTAQEAIDYLKKTK

Nucleotide


Download         Length: 1077 bp        

>NTDB_id=940864 V6U70_RS08195 WP_048674793.1 1800706..1801782(-) (sepM) [Streptococcus salivarius strain KSS12]
GTGGCAAACAAGAACGAATCTAAATCACTATTAGGGAAACTTTGGCGGATTAAGTGGTGGTTGTTAAGTATTTTTACGGT
ACTTTTCCTCCTATTTGCCCTCTTTTTCCCGCTAAATAATTATTATGTTGAGCTTCCGGGTGGTGCTTTTGATACCAAGG
AAGTCTTGACTGTAGATAAGAAAGCTGATGATTCAAAAGGATCCTACAATTTTGTGGCAGTGGCTCAAACCAAGGCGACT
TTGGCCTTGATGCTCTATGCTCAGCTTAATGATTTTGCAAAGCTTCAAACAGCTGAAGAGGCAACTGGAAATTACTCTGA
TGAAGATTTCATGCGTATCAACCAATTTTACATGGAGACTTCCCAAAACCAAGCGATTTATCAGGGCTTGACTCTGGCCG
GTAAGGAGGCTAGCTTGGAGTATATGGGTGTCTATGTGCTTCAGGTGGCTGATGATTCTAGCTTCAAGGGTGTCCTCAAT
ATTGCGGATACGGTGACAGCTGTCAATGGCAAGACCTTTGATAATTCTGCTGACTTGATTAAATACGTTCAAGGACTTAA
GCTGGGTTCAAAAGTCAAGGTCACTTATACGACAGATGACAAAGAAAAGACTGCCACTGGTAAGATTATCAAGATTGCCA
ATGGTAAAAATGGTATTGGTATCGGTTTGACAGATCATACCGAGGTCAAAAGTCCTGAAAATGTGAAGTTTAAACTTGAT
GGTGTTGGCGGCCCAAGTGCGGGTCTTATGTTTACCTTAGCTATTTACGATCAGGTGTCTGGTCAAAATCTTAAGGCTGG
TCGTAAGATTGCTGGAACAGGAACCATTGAAAAGGATGGTTCTGTCGGTGATATCGGTGGTGCCTACCTTAAGGTGAAAT
CAGCGGCTGATAGTGGTGCAGACATTTTCTTTGTACCAAATAATCCGGTAACCAAGGAAATGAAAAAGGCTGATCCGGAT
GCCAAAACCAACTATCAAGAGGCCAAGGAAGCTGCCAAGAAACTGGGAACCAAGATGAAAATCGTCCCTGTTAAAACAGC
GCAAGAAGCCATTGATTATTTGAAAAAGACTAAATAA

Domains


Predicted by InterproScan.

(142-206)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

65.103

95.251

0.62