Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   V6U70_RS07980 Genome accession   NZ_CP145868
Coordinates   1752547..1753278 (-) Length   243 a.a.
NCBI ID   WP_014634937.1    Uniprot ID   A0A2I1TM44
Organism   Streptococcus salivarius strain KSS12     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1747547..1758278
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U70_RS07955 (V6U70_07950) - 1748615..1749796 (+) 1182 WP_410532338.1 NAD(P)/FAD-dependent oxidoreductase -
  V6U70_RS07965 (V6U70_07960) trmB 1750013..1750654 (-) 642 WP_003096317.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  V6U70_RS07970 (V6U70_07965) ccrZ 1750664..1751455 (-) 792 WP_002884270.1 cell cycle regulator CcrZ -
  V6U70_RS07975 (V6U70_07970) pptB 1751513..1752547 (-) 1035 WP_371748832.1 ABC transporter permease Regulator
  V6U70_RS07980 (V6U70_07975) pptA 1752547..1753278 (-) 732 WP_014634937.1 ABC transporter ATP-binding protein Regulator
  V6U70_RS07985 (V6U70_07980) - 1753343..1753762 (+) 420 WP_014634938.1 HIT family protein -
  V6U70_RS07990 (V6U70_07985) - 1753759..1754058 (+) 300 WP_014634939.1 hypothetical protein -
  V6U70_RS07995 (V6U70_07990) - 1754706..1756811 (-) 2106 WP_289092916.1 AAA family ATPase -
  V6U70_RS08000 (V6U70_07995) - 1757536..1757790 (-) 255 WP_014634942.1 Txe/YoeB family addiction module toxin -
  V6U70_RS08005 (V6U70_08000) - 1757794..1758048 (-) 255 WP_013991075.1 type II toxin-antitoxin system Phd/YefM family antitoxin -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26845.15 Da        Isoelectric Point: 4.6019

>NTDB_id=940862 V6U70_RS07980 WP_014634937.1 1752547..1753278(-) (pptA) [Streptococcus salivarius strain KSS12]
MLKLEKVTGGYANIPVLKDVTFEVADGELVGLIGLNGAGKSTTINEIIGLLTPYGGQIAIDGLTIQQDSASYRQKIGYIP
ETPSLYEELTLREHLKTVLMAYGLDVTEGMARADKYLKLFRLDEKLDWFPTQFSKGMKQKVMIICAFIVNPSLFIVDEPF
LGLDPLAISDLIELLAEEKAKGKAILMSTHVLDSAEKMCDRFVILHHGQVLAQGTLEELRQTFGDDSASLNDIYMQLTKG
ELS

Nucleotide


Download         Length: 732 bp        

>NTDB_id=940862 V6U70_RS07980 WP_014634937.1 1752547..1753278(-) (pptA) [Streptococcus salivarius strain KSS12]
ATGCTTAAATTAGAAAAGGTGACGGGTGGTTACGCTAATATTCCCGTCCTAAAAGATGTGACTTTTGAGGTGGCTGATGG
CGAATTAGTTGGTCTTATCGGTCTTAATGGTGCTGGGAAATCAACAACAATTAACGAGATTATTGGTCTCTTAACACCTT
ATGGGGGACAGATTGCCATTGATGGGTTAACCATTCAGCAAGATTCAGCTAGCTATCGTCAGAAGATTGGTTACATCCCT
GAAACGCCAAGCCTCTATGAAGAATTGACGCTTCGTGAACATTTGAAAACGGTGTTGATGGCCTATGGTCTTGATGTGAC
TGAAGGAATGGCACGTGCGGACAAGTACCTTAAGCTCTTTCGTTTAGATGAAAAGCTAGATTGGTTCCCGACTCAGTTTT
CAAAGGGGATGAAGCAGAAGGTCATGATTATCTGTGCCTTTATTGTGAACCCAAGTCTTTTCATTGTTGATGAACCTTTC
TTGGGCTTGGACCCCTTGGCAATCTCCGACTTAATTGAGCTTTTAGCTGAGGAAAAAGCTAAGGGCAAGGCAATTCTCAT
GTCTACACACGTTTTGGATTCGGCTGAGAAGATGTGTGACCGCTTCGTGATTTTGCACCATGGACAGGTCTTGGCACAGG
GAACTCTTGAGGAGCTCCGTCAGACTTTTGGCGATGATAGTGCTAGTCTTAACGATATCTACATGCAGTTAACTAAGGGA
GAATTGTCATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2I1TM44

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

98.765

100

0.988
  pptA Streptococcus thermophilus LMD-9

96.708

100

0.967