Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   V6U70_RS04445 Genome accession   NZ_CP145868
Coordinates   906870..907682 (+) Length   270 a.a.
NCBI ID   WP_048790820.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS12     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 901870..912682
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U70_RS04420 (V6U70_04420) - 902203..902901 (-) 699 WP_410532946.1 amino acid ABC transporter permease -
  V6U70_RS04425 (V6U70_04425) - 902919..903752 (-) 834 WP_175061770.1 transporter substrate-binding domain-containing protein -
  V6U70_RS04430 (V6U70_04430) - 903762..904529 (-) 768 WP_002885036.1 amino acid ABC transporter ATP-binding protein -
  V6U70_RS04435 (V6U70_04435) vicR 904824..905531 (+) 708 WP_037600497.1 response regulator YycF Regulator
  V6U70_RS04440 (V6U70_04440) vicK 905524..906864 (+) 1341 WP_013990681.1 cell wall metabolism sensor histidine kinase VicK Regulator
  V6U70_RS04445 (V6U70_04445) vicX 906870..907682 (+) 813 WP_048790820.1 MBL fold metallo-hydrolase Regulator
  V6U70_RS04450 (V6U70_04450) - 907741..908100 (+) 360 WP_045769141.1 YbaN family protein -
  V6U70_RS04455 (V6U70_04455) - 908152..909366 (-) 1215 WP_048790819.1 aminoacyltransferase -
  V6U70_RS04460 (V6U70_04460) yidA 909368..910177 (-) 810 WP_002890845.1 sugar-phosphatase -
  V6U70_RS04465 (V6U70_04465) - 910355..911221 (+) 867 WP_410532950.1 GNAT family N-acetyltransferase -
  V6U70_RS04470 (V6U70_04470) - 911304..911690 (+) 387 WP_048790817.1 DUF1934 domain-containing protein -

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30122.99 Da        Isoelectric Point: 5.3499

>NTDB_id=940845 V6U70_RS04445 WP_048790820.1 906870..907682(+) (vicX) [Streptococcus salivarius strain KSS12]
MTSDLGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVGVLARKYGM
DIYANEKTWQIMDSKNMLGKIDNSQKHIFSRDKLLTFGDLDIESFGVSHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMA
GIIENADGYLIESNHDVEILRAGSYPWSTKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAHMTME
NQLARADFGVGTDFKVYDTSPDTATPLTDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=940845 V6U70_RS04445 WP_048790820.1 906870..907682(+) (vicX) [Streptococcus salivarius strain KSS12]
ATGACCTCAGATTTAGGGTTTAAATATAGTATTTTGGCTTCAGGGTCAACTGGTAATTCCTTTTACTTGGAAACTCCAGA
GAAGAAGATTCTTGTAGATGCTGGTTTGTCTGGTAAGAAAATCACAAGTTTGCTAGCTGAGATTGATCGTGATCCGAGTG
ATTTGGATGCAATCTTAGTAACGCATGAACACAAGGATCATATCCATGGTGTAGGCGTTTTAGCTCGTAAATATGGCATG
GATATCTACGCAAATGAGAAAACTTGGCAGATTATGGATAGTAAAAATATGCTAGGCAAGATTGATAATAGCCAGAAACA
TATTTTTTCTCGTGATAAGCTTCTGACCTTTGGAGACCTTGATATTGAGTCTTTTGGAGTTAGCCACGATGCTATTGATC
CACAGTTCTATCGCTTTATGAAAGATGGAAAGAGTTTCGTTATGTTGACGGATACGGGTTATGTTTCTGATCGTATGGCA
GGTATTATTGAGAATGCCGACGGCTATCTGATTGAGTCCAATCATGATGTTGAAATCCTTAGAGCAGGTTCATATCCTTG
GTCAACCAAGCAACGTATCCTCTCTGATCAAGGTCACTTGTGTAATGAAGATGGAGCGGATGCTATGATTCGTACCATTG
GTAATAAAACTAAAAAGATCTACTTGGGTCACCTTTCCAAAGAAAATAATATCAAGGAGTTGGCCCACATGACGATGGAA
AATCAGTTGGCACGTGCTGACTTTGGTGTTGGAACTGACTTTAAAGTTTATGATACCTCACCAGACACAGCGACTCCACT
GACAGATATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-214)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.239

99.259

0.767