Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   V6U69_RS01850 Genome accession   NZ_CP145867
Coordinates   345893..346969 (+) Length   358 a.a.
NCBI ID   WP_410534043.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS10     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 340893..351969
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U69_RS01820 (V6U69_01820) - 341784..342530 (+) 747 WP_095559509.1 amino acid ABC transporter permease -
  V6U69_RS01825 (V6U69_01825) - 342530..343273 (+) 744 WP_247924767.1 amino acid ABC transporter ATP-binding protein -
  V6U69_RS01830 (V6U69_01830) - 343485..343709 (+) 225 WP_002884393.1 DUF4059 family protein -
  V6U69_RS01835 (V6U69_01835) trxB 343775..344695 (+) 921 WP_201552365.1 thioredoxin-disulfide reductase -
  V6U69_RS01840 (V6U69_01840) rsmD 344837..345385 (+) 549 WP_080571436.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  V6U69_RS01845 (V6U69_01845) coaD 345418..345915 (+) 498 WP_002891701.1 pantetheine-phosphate adenylyltransferase -
  V6U69_RS01850 (V6U69_01850) sepM 345893..346969 (+) 1077 WP_410534043.1 SepM family pheromone-processing serine protease Regulator
  V6U69_RS01855 (V6U69_01855) - 347055..347999 (+) 945 WP_198463648.1 TIGR01212 family radical SAM protein -
  V6U69_RS01860 (V6U69_01860) - 347996..348544 (+) 549 WP_198463649.1 tRNA (mnm(5)s(2)U34)-methyltransferase -
  V6U69_RS01865 (V6U69_01865) - 348541..348783 (+) 243 WP_002891697.1 hypothetical protein -
  V6U69_RS01870 (V6U69_01870) - 348792..350858 (+) 2067 WP_410534045.1 cation:proton antiporter -
  V6U69_RS01875 (V6U69_01875) - 350891..351211 (-) 321 WP_175057283.1 hypothetical protein -

Sequence


Protein


Download         Length: 358 a.a.        Molecular weight: 39018.80 Da        Isoelectric Point: 9.3844

>NTDB_id=940767 V6U69_RS01850 WP_410534043.1 345893..346969(+) (sepM) [Streptococcus salivarius strain KSS10]
MANKNESKSLLGKIWRIKWWLLSIFTVLFILFALFFPLNNYYVELPGGAFDTKEVLTVDKKADDSKGSYNFVAVAQTKAT
LALMLYAQLNDFAKLQTAEEATGNYSDEDFMRINQFYMETSQNQAIYQGLTLAGKEASLEYMGVYVLQVADDSSFKGVLN
IADTVTAVNGKTFDNSTDLIKYVQGLKLGSKVKVTYMTEDKEKTATGKIIKIANGKNGIGIGLTDHTEVKSPENVKFKLD
GVGGPSAGLMFTLAIYDQVSGQDLKAGRKIAGTGTIEKAGSVGDIGGAYLKVKSAADSGADIFFVPNNPVTKEMKKADPD
AKTNYQEAKEAAKKLGTKMKIVPVKTAQEAIDYLKKTK

Nucleotide


Download         Length: 1077 bp        

>NTDB_id=940767 V6U69_RS01850 WP_410534043.1 345893..346969(+) (sepM) [Streptococcus salivarius strain KSS10]
GTGGCAAACAAGAACGAATCTAAATCACTATTAGGGAAAATTTGGCGTATTAAGTGGTGGTTGCTAAGTATTTTTACGGT
ACTGTTCATCCTGTTTGCTCTCTTTTTCCCGCTAAATAATTATTATGTTGAGCTTCCGGGTGGTGCTTTTGATACTAAGG
AAGTCTTGACTGTAGATAAGAAAGCTGATGATTCAAAAGGATCCTACAATTTTGTGGCAGTGGCTCAAACTAAGGCGACT
TTGGCCCTCATGCTCTATGCTCAGCTTAATGATTTTGCAAAGCTTCAAACAGCTGAAGAGGCAACTGGAAATTACTCTGA
TGAAGATTTCATGCGTATCAATCAATTCTACATGGAGACTTCCCAAAACCAGGCGATTTATCAGGGCTTGACTCTGGCTG
GTAAGGAGGCTAGCTTGGAGTATATGGGTGTTTATGTGCTTCAGGTGGCTGATGATTCTAGTTTCAAGGGTGTCCTTAAT
ATTGCGGATACAGTGACAGCTGTCAATGGCAAGACCTTTGACAATTCTACTGACTTGATTAAATACGTCCAAGGACTTAA
GTTGGGTTCAAAAGTCAAGGTCACTTATATGACAGAGGACAAAGAAAAGACTGCCACTGGTAAGATCATTAAGATTGCTA
ATGGTAAAAATGGTATCGGTATTGGTTTGACGGATCATACTGAGGTCAAGAGTCCTGAAAACGTGAAGTTTAAACTTGAT
GGTGTTGGTGGACCAAGTGCGGGGCTTATGTTTACTTTGGCTATCTACGATCAGGTGTCTGGTCAAGACCTCAAGGCTGG
CCGTAAAATTGCTGGAACAGGAACCATTGAAAAGGCTGGTTCTGTCGGTGATATCGGTGGTGCCTACCTCAAGGTGAAAT
CGGCGGCTGATAGTGGCGCAGACATTTTCTTCGTGCCAAATAATCCAGTAACTAAGGAAATGAAAAAGGCTGATCCGGAT
GCCAAGACTAATTATCAAGAGGCCAAGGAAGCTGCCAAGAAACTGGGAACCAAGATGAAAATCGTCCCTGTTAAAACAGC
TCAAGAAGCCATTGATTATTTGAAAAAGACTAAGTAA

Domains


Predicted by InterproScan.

(142-206)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

64.809

95.251

0.617