Detailed information NTG0940763

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: V6U69_RS00920
• Genome accession: NZ_CP145867
• Coordinates: 160086..161447 (+)
• Length: 453 a.a.
• NCBI ID: WP_368386689.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain KSS10
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 155086..166447

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6U69_RS00890 (V6U69_00890)	-	155611..156171 (-)	561	WP_410533926.1	MptD family putative ECF transporter S component	-
V6U69_RS00895 (V6U69_00895)	-	156180..156971 (-)	792	WP_002885797.1	formate/nitrite transporter family protein	-
V6U69_RS00900 (V6U69_00900)	-	157088..158338 (-)	1251	WP_002885631.1	NAD(P)H-dependent oxidoreductase	-
V6U69_RS00905 (V6U69_00905)	-	158357..158959 (-)	603	WP_002886986.1	NADPH-dependent FMN reductase	-
V6U69_RS00910 (V6U69_00910)	-	159166..159612 (+)	447	WP_175057814.1	dUTP diphosphatase	-
V6U69_RS00915 (V6U69_00915)	-	159622..160089 (+)	468	WP_201041165.1	isochorismatase family protein	-
V6U69_RS00920 (V6U69_00920)	radA	160086..161447 (+)	1362	WP_368386689.1	DNA repair protein RadA	Machinery gene
V6U69_RS00925 (V6U69_00925)	-	161536..162231 (+)	696	WP_037598509.1	TIGR00266 family protein	-
V6U69_RS00930 (V6U69_00930)	-	162383..162880 (+)	498	WP_073689648.1	beta-class carbonic anhydrase	-
V6U69_RS00935 (V6U69_00935)	-	162975..163328 (-)	354	WP_002885872.1	DUF3397 domain-containing protein	-
V6U69_RS00940 (V6U69_00940)	rplK	163500..163925 (+)	426	WP_002885648.1	50S ribosomal protein L11	-
V6U69_RS00945 (V6U69_00945)	rplA	164025..164714 (+)	690	WP_073689647.1	50S ribosomal protein L1	-

Sequence

Protein

• Length: 453 a.a.
• Molecular weight: 49462.92 Da
• Isoelectric Point: 6.6528

>NTDB_id=940763 V6U69_RS00920 WP_368386689.1 160086..161447(+) (radA) [Streptococcus salivarius strain KSS10]
MAKKKSTFVCRECGYNSPKYLGRCPNCSSWSSFEEEVEVQEVKNARVSLTGEKSKPTKLKEVSSINYARIKTDMDEFNRV
LGGGVVPGSLVLIGGDPGIGKSTLLLQVSTQLANKGTVLYVSGEESAEQIKLRSERLGDIDNEFYLYAETNMQAVRSQVE
AIKPDFLIIDSIQTIMSPEISGVQGSVSQVREVTAELMQIAKTNNIATFIVGHVTKEGQLAGPRMLEHMVDTVLYFEGER
HHTFRILRAVKNRFGSTNEIGIFEMQSGGLVEVLNPSQVFLEERLDGATGSAIVVTMEGSRPILAEVQALVTPTVFGNAK
RTTTGLDFNRVSLIMAVLEKRCGLLLQNQDAYLKSAGGVKLDEPAIDLAVAVAIASSYKELPTIPQEAFIGEIGLTGEIR
RVTRIEQRINEAAKLGFTKIYAPKNSLHGMKIPEGIQVIGVTTVGEVLKKVFS

Nucleotide

• Length: 1362 bp

>NTDB_id=940763 V6U69_RS00920 WP_368386689.1 160086..161447(+) (radA) [Streptococcus salivarius strain KSS10]
ATAGCAAAGAAAAAATCAACTTTTGTTTGTCGAGAATGTGGCTACAATTCGCCCAAATATCTAGGGCGCTGTCCCAACTG
TTCTTCTTGGTCCTCTTTTGAAGAAGAGGTTGAGGTGCAGGAGGTGAAAAATGCCCGTGTCAGTTTGACGGGTGAAAAGT
CTAAACCAACTAAATTAAAAGAAGTATCCTCAATCAATTATGCTCGCATAAAGACTGATATGGACGAGTTTAACCGTGTT
TTAGGTGGCGGTGTGGTTCCGGGCAGTCTGGTTCTTATTGGAGGAGATCCAGGGATAGGGAAATCAACCCTCCTCTTACA
GGTGTCAACGCAACTGGCTAACAAGGGTACGGTCCTCTATGTATCTGGAGAAGAATCTGCCGAGCAAATCAAATTGCGGA
GTGAACGTTTAGGTGATATTGATAACGAATTTTATCTGTATGCTGAGACCAATATGCAAGCCGTTCGCAGTCAAGTAGAG
GCCATAAAACCCGATTTCCTCATTATCGACTCTATTCAGACAATCATGAGTCCAGAGATTTCTGGCGTTCAAGGTTCTGT
ATCTCAGGTTCGTGAAGTCACTGCTGAACTCATGCAGATTGCCAAAACCAATAACATTGCCACATTTATTGTTGGGCATG
TGACCAAGGAGGGACAGCTGGCAGGACCACGTATGTTGGAACACATGGTGGATACTGTGCTCTATTTTGAGGGGGAACGT
CATCATACCTTCCGTATTTTACGAGCAGTCAAAAACCGTTTTGGTTCAACCAATGAGATTGGGATTTTTGAGATGCAGTC
TGGTGGTTTGGTAGAGGTGCTAAATCCTAGCCAGGTTTTCTTAGAGGAACGCCTAGACGGTGCCACAGGTTCTGCCATTG
TTGTGACAATGGAAGGTAGCAGACCTATCTTAGCTGAAGTTCAAGCCTTGGTGACACCAACCGTCTTTGGTAATGCCAAG
CGGACAACGACGGGACTGGACTTTAACCGTGTCAGCCTCATTATGGCTGTTTTAGAGAAACGTTGTGGCCTTCTTCTCCA
AAATCAAGATGCCTATCTCAAATCGGCTGGTGGTGTCAAATTGGACGAGCCAGCTATTGACCTTGCTGTAGCCGTTGCGA
TTGCTTCTAGTTACAAGGAGCTTCCAACCATTCCACAAGAAGCTTTTATAGGAGAAATTGGGTTGACTGGAGAGATTCGC
CGAGTAACTCGCATTGAACAGCGTATTAATGAAGCTGCTAAATTAGGTTTTACTAAGATTTATGCTCCAAAGAATTCCCT
GCATGGCATGAAAATTCCAGAAGGTATCCAGGTCATTGGGGTCACGACGGTAGGAGAAGTACTCAAAAAAGTCTTTTCTT
AA

Domains

Predicted by InterproScan.

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (8-35)

• AAA domain (AAA_25) (63-218)

• Subunit ChlI of Mg-chelatase (ChlI) (360-425)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Streptococcus pneumoniae Rx1	88.742	100	0.887
radA	Streptococcus pneumoniae D39	88.742	100	0.887
radA	Streptococcus pneumoniae R6	88.742	100	0.887
radA	Streptococcus pneumoniae TIGR4	88.742	100	0.887
radA	Streptococcus mitis NCTC 12261	88.742	100	0.887
radA	Streptococcus mitis SK321	88.742	100	0.887
radA	Bacillus subtilis subsp. subtilis str. 168	61.369	100	0.614