Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   V6U68_RS08270 Genome accession   NZ_CP145866
Coordinates   1799061..1800137 (-) Length   358 a.a.
NCBI ID   WP_070839178.1    Uniprot ID   A0A9D8KKX9
Organism   Streptococcus salivarius strain KSS9     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1794061..1805137
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U68_RS08245 (V6U68_08225) - 1794819..1795139 (+) 321 WP_002891695.1 hypothetical protein -
  V6U68_RS08250 (V6U68_08230) - 1795172..1797238 (-) 2067 WP_368386498.1 cation:proton antiporter -
  V6U68_RS08255 (V6U68_08235) - 1797247..1797489 (-) 243 WP_002891697.1 hypothetical protein -
  V6U68_RS08260 (V6U68_08240) - 1797486..1798034 (-) 549 WP_198463649.1 tRNA (mnm(5)s(2)U34)-methyltransferase -
  V6U68_RS08265 (V6U68_08245) - 1798031..1798975 (-) 945 WP_198463648.1 TIGR01212 family radical SAM protein -
  V6U68_RS08270 (V6U68_08250) sepM 1799061..1800137 (-) 1077 WP_070839178.1 SepM family pheromone-processing serine protease Regulator
  V6U68_RS08275 (V6U68_08255) coaD 1800115..1800612 (-) 498 WP_073689504.1 pantetheine-phosphate adenylyltransferase -
  V6U68_RS08280 (V6U68_08260) rsmD 1800645..1801193 (-) 549 WP_410531616.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  V6U68_RS08285 (V6U68_08265) trxB 1801335..1802255 (-) 921 WP_410531617.1 thioredoxin-disulfide reductase -
  V6U68_RS08290 (V6U68_08270) - 1802321..1802545 (-) 225 WP_002884393.1 DUF4059 family protein -
  V6U68_RS08295 (V6U68_08275) - 1802757..1803500 (-) 744 WP_410531618.1 amino acid ABC transporter ATP-binding protein -
  V6U68_RS08300 (V6U68_08280) - 1803500..1804246 (-) 747 WP_195413558.1 amino acid ABC transporter permease -

Sequence


Protein


Download         Length: 358 a.a.        Molecular weight: 39016.72 Da        Isoelectric Point: 9.2472

>NTDB_id=940736 V6U68_RS08270 WP_070839178.1 1799061..1800137(-) (sepM) [Streptococcus salivarius strain KSS9]
MANKNESKSLLGKIWRIKWWLLSIFTVLFLLFALFFPLNNYYVELPGGAFDTKEVLTVDKKADDSKGSYNFVAVAQTKAT
LALMLYAQLNDFAKLQTAEEATGNYSDEDFMRINQFYMETSQNQAIYQGLTLAGKEASLEYMGVYVLQVADDSSFKGVLN
IADTVTAVNGKTFDNSTDLIKYVQGLKLGSKVKVTYTTEDKEKTATGKIIKIANGKNGIGIGLTDHTEVKSPENVKFKLD
GVGGPSAGLMFTLAIYDQVSGQDLKAGRKIAGTGTIEKDGAVGDIGGAYLKVKSAADSGADIFFVPNNPVTKEMKKADPD
AKTNYQEAKEAAKKLGTKMKIVPVKTAQEAIDYLKKTK

Nucleotide


Download         Length: 1077 bp        

>NTDB_id=940736 V6U68_RS08270 WP_070839178.1 1799061..1800137(-) (sepM) [Streptococcus salivarius strain KSS9]
GTGGCAAACAAGAACGAATCTAAATCACTATTAGGGAAAATTTGGCGGATTAAGTGGTGGTTATTAAGTATTTTTACGGT
ACTGTTCCTCCTGTTTGCTCTCTTTTTCCCGCTAAATAATTATTATGTTGAGCTTCCGGGTGGTGCTTTTGATACTAAGG
AAGTCTTGACTGTAGATAAGAAAGCTGATGATTCAAAAGGATCCTACAATTTTGTGGCAGTGGCTCAAACCAAGGCGACT
TTGGCCCTCATGCTCTATGCTCAGCTTAATGATTTTGCAAAGCTTCAAACGGCTGAAGAGGCGACTGGAAATTACTCTGA
CGAAGATTTCATGCGTATTAACCAGTTTTACATGGAGACTTCCCAAAACCAGGCGATTTATCAGGGCTTGACTCTGGCTG
GTAAGGAGGCTAGCTTGGAGTATATGGGTGTTTATGTGCTTCAGGTGGCTGATGATTCTAGTTTCAAGGGTGTCCTTAAT
ATTGCGGATACGGTGACAGCTGTCAATGGCAAGACCTTTGATAATTCTACTGACTTGATTAAATACGTCCAGGGACTTAA
GTTGGGTTCAAAAGTCAAGGTCACTTATACGACAGAGGACAAAGAAAAGACTGCCACTGGTAAGATCATTAAGATTGCTA
ATGGTAAAAATGGTATCGGTATTGGTTTGACGGATCATACTGAGGTCAAGAGTCCTGAAAACGTGAAGTTTAAACTTGAT
GGTGTTGGTGGACCAAGTGCGGGGCTTATGTTTACTTTGGCTATTTACGATCAGGTGTCTGGTCAAGACCTCAAGGCTGG
CCGTAAAATTGCTGGAACAGGCACTATTGAAAAGGACGGGGCTGTCGGTGATATCGGTGGGGCCTACCTCAAGGTGAAAT
CAGCGGCTGATAGTGGCGCAGATATTTTCTTCGTGCCAAATAATCCAGTAACTAAGGAAATGAAAAAGGCTGATCCGGAT
GCTAAGACTAATTATCAAGAGGCTAAGGAAGCTGCCAAGAAACTGGGGACCAAGATGAAAATCGTTCCTGTTAAAACAGC
TCAAGAAGCCATTGATTATTTGAAAAAGACTAAGTAA

Domains


Predicted by InterproScan.

(142-206)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

65.396

95.251

0.623