Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   V6U68_RS03790 Genome accession   NZ_CP145866
Coordinates   743194..743487 (+) Length   97 a.a.
NCBI ID   WP_002890617.1    Uniprot ID   J7TXL7
Organism   Streptococcus salivarius strain KSS9     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 738194..748487
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U68_RS03775 (V6U68_03770) - 740219..741352 (+) 1134 WP_156246616.1 AbiH family protein -
  V6U68_RS03780 (V6U68_03775) - 741459..742673 (+) 1215 WP_410531956.1 restriction endonuclease subunit S -
  V6U68_RS03785 (V6U68_03780) - 742839..743204 (+) 366 WP_156247079.1 type II toxin-antitoxin system RelE/ParE family toxin -
  V6U68_RS03790 (V6U68_03785) HI0659 743194..743487 (+) 294 WP_002890617.1 helix-turn-helix domain-containing protein Machinery gene
  V6U68_RS03795 (V6U68_03790) - 743509..745110 (+) 1602 WP_410531957.1 type I restriction-modification system subunit M -
  V6U68_RS03800 (V6U68_03795) - 745189..746088 (+) 900 WP_064523419.1 Rpn family recombination-promoting nuclease/putative transposase -

Sequence

Protein


Download         Length: 97 a.a.        Molecular weight: 10778.52 Da        Isoelectric Point: 5.8962

>NTDB_id=940712 V6U68_RS03790 WP_002890617.1 743194..743487(+) (HI0659) [Streptococcus salivarius strain KSS9]
MKNSAIGSNWKDVRAELFTKEEILESDLRVAIMTELIEARHEKGFSQKKLEELSGVSQPVIARMETGKTSPQLDTVLKVL
ASLGKTLAVVPLEQEKL

Nucleotide


Download         Length: 294 bp        

>NTDB_id=940712 V6U68_RS03790 WP_002890617.1 743194..743487(+) (HI0659) [Streptococcus salivarius strain KSS9]
ATGAAGAATAGTGCCATTGGCAGCAATTGGAAAGATGTGAGAGCAGAGCTCTTCACAAAGGAAGAAATCCTGGAAAGTGA
TCTGCGGGTCGCGATTATGACGGAGCTAATCGAGGCTCGGCATGAAAAGGGCTTTAGCCAAAAGAAACTAGAAGAACTCA
GTGGGGTCAGTCAACCGGTCATCGCTCGGATGGAGACGGGAAAGACCAGTCCTCAATTGGACACGGTCTTGAAAGTCTTA
GCCAGTCTGGGCAAGACCCTTGCTGTCGTCCCACTGGAACAAGAAAAGCTCTAA

Domains

Predicted by InterproScan.

Helix-turn-helix (HTH_3)

(37-88)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB J7TXL7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

59.341

93.814

0.557