Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | NGJ61_RS17115 | Genome accession | NZ_AP025770 |
| Coordinates | 3555767..3556825 (-) | Length | 352 a.a. |
| NCBI ID | WP_022649140.1 | Uniprot ID | A0A330DB80 |
| Organism | Enterobacter hormaechei strain FUJ80003 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 3522443..3559296 | 3555767..3556825 | within | 0 |
Gene organization within MGE regions
Location: 3522443..3559296
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NGJ61_RS16925 (FJMB80003_33280) | - | 3522443..3523399 (-) | 957 | WP_022649119.1 | carbamate kinase family protein | - |
| NGJ61_RS16930 (FJMB80003_33290) | - | 3523396..3524976 (-) | 1581 | WP_022649120.1 | hypothetical protein | - |
| NGJ61_RS16935 (FJMB80003_33300) | - | 3524988..3526403 (-) | 1416 | WP_022649121.1 | DUF1116 domain-containing protein | - |
| NGJ61_RS16940 (FJMB80003_33310) | fdrA | 3526403..3527944 (-) | 1542 | WP_023330176.1 | acyl-CoA synthetase FdrA | - |
| NGJ61_RS16945 (FJMB80003_33320) | - | 3528053..3528658 (-) | 606 | WP_022649123.1 | ankyrin repeat domain-containing protein | - |
| NGJ61_RS16950 (FJMB80003_33330) | - | 3528979..3529908 (+) | 930 | WP_022649124.1 | LysR substrate-binding domain-containing protein | - |
| NGJ61_RS16955 (FJMB80003_33340) | - | 3529905..3530063 (-) | 159 | WP_003862203.1 | YqaE/Pmp3 family membrane protein | - |
| NGJ61_RS16960 (FJMB80003_33350) | - | 3530243..3530761 (+) | 519 | WP_022649125.1 | rhodanese family protein | - |
| NGJ61_RS16965 (FJMB80003_33360) | - | 3530844..3531023 (+) | 180 | WP_006811690.1 | hypothetical protein | - |
| NGJ61_RS16970 (FJMB80003_33370) | stpA | 3531061..3531465 (-) | 405 | WP_022649126.1 | DNA-binding protein StpA | - |
| NGJ61_RS16975 (FJMB80003_33380) | alaE | 3531963..3532412 (+) | 450 | WP_022649127.1 | L-alanine exporter AlaE | - |
| NGJ61_RS16980 (FJMB80003_33390) | - | 3532445..3532789 (-) | 345 | WP_006811693.1 | DUF2002 family protein | - |
| NGJ61_RS16985 (FJMB80003_33400) | - | 3532948..3533274 (+) | 327 | WP_017382769.1 | DUF883 domain-containing protein | - |
| NGJ61_RS16990 (FJMB80003_33410) | nrdH | 3533518..3533757 (+) | 240 | WP_017382770.1 | glutaredoxin-like protein NrdH | - |
| NGJ61_RS16995 (FJMB80003_33420) | nrdI | 3533754..3534164 (+) | 411 | WP_022649128.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| NGJ61_RS17000 (FJMB80003_33430) | nrdE | 3534137..3536281 (+) | 2145 | WP_022649129.1 | class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| NGJ61_RS17005 (FJMB80003_33440) | nrdF | 3536291..3537250 (+) | 960 | WP_022649130.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| NGJ61_RS17010 (FJMB80003_33450) | proV | 3537584..3538786 (+) | 1203 | WP_022649131.1 | glycine betaine/L-proline ABC transporter ATP-binding protein ProV | - |
| NGJ61_RS17015 (FJMB80003_33460) | proW | 3538779..3539843 (+) | 1065 | WP_022649132.1 | glycine betaine/L-proline ABC transporter permease ProW | - |
| NGJ61_RS17020 (FJMB80003_33470) | proX | 3539853..3540848 (+) | 996 | WP_017382774.1 | glycine betaine/L-proline ABC transporter substrate-binding protein ProX | - |
| NGJ61_RS17025 (FJMB80003_33480) | - | 3541058..3542242 (+) | 1185 | WP_017692795.1 | MFS transporter | - |
| NGJ61_RS17030 (FJMB80003_33490) | emrR | 3542557..3543087 (+) | 531 | WP_017694792.1 | multidrug efflux transporter EmrAB transcriptional repressor EmrR | - |
| NGJ61_RS17035 (FJMB80003_33500) | emrA | 3543216..3544388 (+) | 1173 | WP_022649133.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
| NGJ61_RS17040 (FJMB80003_33510) | emrB | 3544405..3545952 (+) | 1548 | WP_022649134.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| NGJ61_RS17045 (FJMB80003_33520) | - | 3546037..3547143 (-) | 1107 | WP_226860881.1 | DDE-type integrase/transposase/recombinase | - |
| NGJ61_RS17050 | - | 3547454..3547597 (+) | 144 | Protein_3347 | hypothetical protein | - |
| NGJ61_RS17055 (FJMB80003_33550) | luxS | 3547659..3548174 (-) | 516 | WP_003862180.1 | S-ribosylhomocysteine lyase | - |
| NGJ61_RS17060 (FJMB80003_33560) | gshA | 3548327..3549871 (-) | 1545 | WP_022649137.1 | glutamate--cysteine ligase | - |
| NGJ61_RS17065 (FJMB80003_33570) | - | 3549955..3550383 (-) | 429 | WP_017692791.1 | YqaA family protein | - |
| NGJ61_RS17070 (FJMB80003_33580) | yqaB | 3550380..3550946 (-) | 567 | WP_022649138.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| NGJ61_RS17100 (FJMB80003_33590) | csrA | 3552012..3552197 (-) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| NGJ61_RS17105 (FJMB80003_33600) | alaS | 3552439..3555066 (-) | 2628 | WP_022649139.1 | alanine--tRNA ligase | - |
| NGJ61_RS17110 (FJMB80003_33610) | recX | 3555198..3555698 (-) | 501 | WP_017382782.1 | recombination regulator RecX | - |
| NGJ61_RS17115 (FJMB80003_33620) | recA | 3555767..3556825 (-) | 1059 | WP_022649140.1 | recombinase RecA | Machinery gene |
| NGJ61_RS17120 (FJMB80003_33630) | pncC | 3556915..3557412 (-) | 498 | WP_003862172.1 | nicotinamide-nucleotide amidase | - |
| NGJ61_RS17125 (FJMB80003_33640) | - | 3557543..3558421 (-) | 879 | WP_022649141.1 | metal ABC transporter substrate-binding protein | - |
| NGJ61_RS17130 (FJMB80003_33650) | - | 3558436..3559296 (-) | 861 | WP_251265925.1 | metal ABC transporter permease | - |
Sequence
Protein
Download Length: 352 a.a. Molecular weight: 37777.21 Da Isoelectric Point: 4.8095
>NTDB_id=94071 NGJ61_RS17115 WP_022649140.1 3555767..3556825(-) (recA) [Enterobacter hormaechei strain FUJ80003]
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
VAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGDNVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFLGELVDLGVKEKLIEKAGAWYSYNGDKIGQGKANAISWLKENPAAAKEI
EKKVRELLLSNQDSKPDFVVDGADAEETNEDF
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
VAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGDNVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFLGELVDLGVKEKLIEKAGAWYSYNGDKIGQGKANAISWLKENPAAAKEI
EKKVRELLLSNQDSKPDFVVDGADAEETNEDF
Nucleotide
Download Length: 1059 bp
>NTDB_id=94071 NGJ61_RS17115 WP_022649140.1 3555767..3556825(-) (recA) [Enterobacter hormaechei strain FUJ80003]
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCACTGGGCCAGATCGAAAAGCAATTCGGTAAAGGCTCCAT
CATGCGCCTGGGTGAAGACCGTTCCATGGATGTGGAAACTATCTCCACTGGTTCGCTTTCTCTTGATATCGCACTGGGCG
CTGGCGGTTTGCCGATGGGCCGTATCGTAGAAATCTACGGTCCGGAATCCTCGGGTAAAACCACCCTGACGTTGCAGGTT
GTTGCGGCGGCACAGCGCGAAGGTAAAACCTGTGCGTTTATCGATGCCGAGCACGCGCTGGACCCGGTCTATGCCCGTAA
ACTGGGCGTTGATATCGACAACCTGCTGTGCTCCCAGCCGGATACCGGCGAGCAGGCCCTGGAAATTTGTGACGCGCTGG
CGCGCTCAGGTGCGGTTGACGTGATCATCGTCGACTCCGTTGCGGCGCTGACGCCAAAAGCAGAAATTGAAGGTGAAATC
GGTGACTCTCACATGGGCCTCGCGGCACGTATGATGAGCCAGGCGATGCGTAAGCTGGCGGGTAACCTGAAGCAGTCCAA
TACGCTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGTGTAATGTTCGGTAACCCGGAAACCACCACCGGCGGTA
ACGCTCTGAAATTCTACGCTTCTGTCCGTCTGGATATCCGCCGTATCGGCGCGGTGAAAGAGGGGGATAACGTCGTCGGT
AGCGAAACCCGCGTGAAGGTTGTGAAGAACAAAATCGCAGCACCGTTCAAACAGGCTGAGTTCCAGATCCTCTACGGCGA
AGGTATCAACTTCCTCGGCGAGCTGGTTGACCTGGGCGTGAAAGAGAAGCTGATTGAAAAAGCGGGCGCATGGTACAGCT
ACAACGGTGACAAGATTGGTCAGGGTAAAGCGAATGCTATCTCCTGGCTGAAAGAGAACCCGGCGGCGGCGAAAGAGATT
GAGAAGAAGGTGCGTGAACTCCTGCTGAGCAACCAGGACTCTAAACCTGATTTCGTGGTCGACGGCGCGGATGCTGAAGA
AACCAACGAAGACTTTTAA
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCACTGGGCCAGATCGAAAAGCAATTCGGTAAAGGCTCCAT
CATGCGCCTGGGTGAAGACCGTTCCATGGATGTGGAAACTATCTCCACTGGTTCGCTTTCTCTTGATATCGCACTGGGCG
CTGGCGGTTTGCCGATGGGCCGTATCGTAGAAATCTACGGTCCGGAATCCTCGGGTAAAACCACCCTGACGTTGCAGGTT
GTTGCGGCGGCACAGCGCGAAGGTAAAACCTGTGCGTTTATCGATGCCGAGCACGCGCTGGACCCGGTCTATGCCCGTAA
ACTGGGCGTTGATATCGACAACCTGCTGTGCTCCCAGCCGGATACCGGCGAGCAGGCCCTGGAAATTTGTGACGCGCTGG
CGCGCTCAGGTGCGGTTGACGTGATCATCGTCGACTCCGTTGCGGCGCTGACGCCAAAAGCAGAAATTGAAGGTGAAATC
GGTGACTCTCACATGGGCCTCGCGGCACGTATGATGAGCCAGGCGATGCGTAAGCTGGCGGGTAACCTGAAGCAGTCCAA
TACGCTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGTGTAATGTTCGGTAACCCGGAAACCACCACCGGCGGTA
ACGCTCTGAAATTCTACGCTTCTGTCCGTCTGGATATCCGCCGTATCGGCGCGGTGAAAGAGGGGGATAACGTCGTCGGT
AGCGAAACCCGCGTGAAGGTTGTGAAGAACAAAATCGCAGCACCGTTCAAACAGGCTGAGTTCCAGATCCTCTACGGCGA
AGGTATCAACTTCCTCGGCGAGCTGGTTGACCTGGGCGTGAAAGAGAAGCTGATTGAAAAAGCGGGCGCATGGTACAGCT
ACAACGGTGACAAGATTGGTCAGGGTAAAGCGAATGCTATCTCCTGGCTGAAAGAGAACCCGGCGGCGGCGAAAGAGATT
GAGAAGAAGGTGCGTGAACTCCTGCTGAGCAACCAGGACTCTAAACCTGATTTCGTGGTCGACGGCGCGGATGCTGAAGA
AACCAACGAAGACTTTTAA
Similar proteins
Only experimentally validated proteins are listed.