Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | V6U68_RS00515 | Genome accession | NZ_CP145866 |
| Coordinates | 82328..84778 (+) | Length | 816 a.a. |
| NCBI ID | WP_410531713.1 | Uniprot ID | - |
| Organism | Streptococcus salivarius strain KSS9 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 77328..89778
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V6U68_RS00490 (V6U68_00490) | ahpC | 78246..78806 (-) | 561 | WP_347111621.1 | alkyl hydroperoxide reductase subunit C | - |
| V6U68_RS00495 (V6U68_00495) | rpsB | 79079..79846 (+) | 768 | WP_002886342.1 | 30S ribosomal protein S2 | - |
| V6U68_RS00500 (V6U68_00500) | tsf | 79957..80997 (+) | 1041 | WP_002886343.1 | translation elongation factor Ts | - |
| V6U68_RS00505 (V6U68_00505) | - | 81103..81573 (-) | 471 | WP_347111620.1 | small multi-drug export protein | - |
| V6U68_RS00510 (V6U68_00510) | - | 81872..82327 (+) | 456 | WP_002889615.1 | CtsR family transcriptional regulator | - |
| V6U68_RS00515 (V6U68_00515) | clpC | 82328..84778 (+) | 2451 | WP_410531713.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| V6U68_RS00520 (V6U68_00520) | pbp3 | 84908..86164 (-) | 1257 | WP_410531714.1 | D-alanyl-D-alanine carboxypeptidase PBP3 | - |
| V6U68_RS00525 (V6U68_00525) | pbp3 | 86309..87556 (-) | 1248 | WP_410531715.1 | D-alanyl-D-alanine carboxypeptidase PBP3 | - |
Sequence
Protein
Download Length: 816 a.a. Molecular weight: 90239.55 Da Isoelectric Point: 5.9166
>NTDB_id=940687 V6U68_RS00515 WP_410531713.1 82328..84778(+) (clpC) [Streptococcus salivarius strain KSS9]
MTTYSRKMQAIFHRAQLEAERFGSPFLETWHVLLAMVEVPGSVAYLTFTDFEDRIRAEEIETAAVLAMEKSPKDLSESDI
IDLRAQSHALEAMLQEAEGIAGVTGAVEVGSEHVLMAFLLHKDLMVCRLLEVAGFQYKDDSDKPRIIDLRRSLERYAGLS
KQDLKAIHDLRKPKKSKASGNFANMMQPPQSSTGELSDYTKDLTAVAESGALDPVIGREKEISRMIQVLSRKTKNNPVLV
GEAGVGKTALALGLAQRIASGEVPFELADMRILELDMMSVVAGTRFRGDFEERMNQIIDEIEADGKIILFIDELHTIIGS
GSGIDSTLDAANILKPALARGTLHMVGATTQAEYQKHIEKDAALSRRFAKITIEEPSVAEAIDILKGLRSSYEDYHRVTI
TDEAVETAVKAAHRYLTSKNLPDSAIDLLDEASATVQGRIKKEAKREITPLDEALLSGDMKAAVKQYKASQKAKLPKPAL
VDADQIMQTLSRLSGIPVEKMTQADSKRYLNLEAELHKRVIGQDEAVSAISRAIRRNQSGIRTGKRPIGSFMFLGPTGVG
KTELAKALAEVLFDDESSLLRFDMSEYMEKFAASRLNGAPPGYVGYDEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNIL
LQVLDDGVLTDSRGRKVDFSNTIIIMTSNLGATALRDDKTVGFGVQDISHNHQAMQSRIMEELKKAYRPEFINRIDEKVV
FHSLEEEQLREIVKIMVKPLVSALAEKGIDLKFQPAALKHLAKDGYDVEMGARPLRRTIQTQVEDKLSELLLGGQVVSGQ
TLKIGCSKDKLTFTVV
MTTYSRKMQAIFHRAQLEAERFGSPFLETWHVLLAMVEVPGSVAYLTFTDFEDRIRAEEIETAAVLAMEKSPKDLSESDI
IDLRAQSHALEAMLQEAEGIAGVTGAVEVGSEHVLMAFLLHKDLMVCRLLEVAGFQYKDDSDKPRIIDLRRSLERYAGLS
KQDLKAIHDLRKPKKSKASGNFANMMQPPQSSTGELSDYTKDLTAVAESGALDPVIGREKEISRMIQVLSRKTKNNPVLV
GEAGVGKTALALGLAQRIASGEVPFELADMRILELDMMSVVAGTRFRGDFEERMNQIIDEIEADGKIILFIDELHTIIGS
GSGIDSTLDAANILKPALARGTLHMVGATTQAEYQKHIEKDAALSRRFAKITIEEPSVAEAIDILKGLRSSYEDYHRVTI
TDEAVETAVKAAHRYLTSKNLPDSAIDLLDEASATVQGRIKKEAKREITPLDEALLSGDMKAAVKQYKASQKAKLPKPAL
VDADQIMQTLSRLSGIPVEKMTQADSKRYLNLEAELHKRVIGQDEAVSAISRAIRRNQSGIRTGKRPIGSFMFLGPTGVG
KTELAKALAEVLFDDESSLLRFDMSEYMEKFAASRLNGAPPGYVGYDEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNIL
LQVLDDGVLTDSRGRKVDFSNTIIIMTSNLGATALRDDKTVGFGVQDISHNHQAMQSRIMEELKKAYRPEFINRIDEKVV
FHSLEEEQLREIVKIMVKPLVSALAEKGIDLKFQPAALKHLAKDGYDVEMGARPLRRTIQTQVEDKLSELLLGGQVVSGQ
TLKIGCSKDKLTFTVV
Nucleotide
Download Length: 2451 bp
>NTDB_id=940687 V6U68_RS00515 WP_410531713.1 82328..84778(+) (clpC) [Streptococcus salivarius strain KSS9]
ATGACGACATATTCAAGAAAAATGCAGGCCATTTTCCATCGTGCGCAGCTTGAGGCAGAGCGTTTTGGAAGTCCTTTTCT
GGAGACTTGGCATGTGCTTCTGGCTATGGTTGAGGTTCCAGGATCTGTAGCCTACCTAACATTTACTGATTTTGAGGACC
GTATTCGTGCGGAAGAGATTGAGACAGCCGCTGTACTAGCGATGGAGAAAAGTCCAAAAGACTTGTCTGAATCAGATATT
ATCGATTTACGTGCACAGTCACATGCTTTAGAGGCTATGTTGCAAGAGGCAGAGGGAATTGCTGGTGTGACTGGTGCTGT
AGAGGTAGGGTCTGAACATGTATTGATGGCCTTTCTCCTTCATAAGGATTTGATGGTTTGTCGTCTCCTTGAAGTTGCTG
GTTTTCAATATAAGGATGACAGTGATAAGCCTCGCATTATCGATTTACGACGTTCTTTGGAGCGTTACGCAGGTCTTAGT
AAGCAAGACTTGAAGGCCATTCATGACCTTCGTAAGCCTAAAAAATCAAAGGCATCAGGAAATTTTGCTAATATGATGCA
GCCTCCCCAATCTTCTACTGGGGAACTGTCAGATTATACCAAGGACTTAACGGCTGTAGCCGAGTCAGGTGCTCTTGATC
CTGTTATTGGACGTGAGAAAGAAATTTCACGCATGATTCAGGTTTTGAGTCGTAAAACGAAGAATAACCCAGTTCTTGTT
GGTGAAGCAGGTGTTGGTAAGACGGCACTGGCGCTTGGCTTGGCACAGCGTATTGCTTCAGGCGAAGTACCTTTTGAGCT
GGCTGATATGCGTATCTTAGAGCTTGATATGATGAGTGTGGTTGCAGGAACACGTTTCCGTGGTGATTTCGAAGAACGTA
TGAATCAAATCATCGATGAGATTGAAGCTGATGGAAAAATCATTCTCTTTATTGACGAACTGCATACGATTATTGGTTCT
GGTTCAGGTATTGATAGTACCTTAGATGCGGCAAATATTTTGAAACCTGCTCTAGCTCGTGGAACCCTTCATATGGTTGG
AGCTACCACTCAAGCAGAGTATCAAAAGCATATTGAGAAAGATGCAGCTCTTTCTCGTCGTTTTGCTAAGATTACAATTG
AGGAGCCAAGTGTAGCTGAGGCGATTGATATTCTAAAAGGCCTACGTTCGTCTTATGAAGACTATCATCGTGTAACGATT
ACTGATGAAGCGGTTGAGACAGCGGTCAAGGCGGCGCATCGTTATTTGACGAGTAAAAACTTACCTGACTCTGCCATTGA
CCTTTTAGATGAAGCGAGTGCGACTGTTCAAGGTCGTATTAAAAAAGAAGCCAAACGTGAGATAACGCCTTTGGATGAAG
CGCTTCTATCTGGTGATATGAAGGCTGCTGTTAAACAATATAAGGCTAGCCAAAAAGCAAAATTACCAAAACCTGCCTTG
GTAGATGCGGATCAGATTATGCAAACCCTTAGTCGTCTATCAGGTATCCCTGTTGAGAAGATGACTCAGGCAGATAGCAA
GCGTTACTTAAATCTGGAAGCAGAGCTTCACAAACGTGTTATTGGTCAAGACGAGGCAGTTTCAGCGATTAGTCGTGCTA
TTCGTCGTAACCAGTCAGGTATTCGTACTGGAAAACGTCCTATTGGTTCCTTCATGTTCCTTGGACCTACTGGTGTTGGT
AAGACAGAATTGGCCAAGGCATTGGCGGAAGTTCTCTTTGATGATGAGTCATCTTTGCTTCGCTTTGACATGTCAGAATA
CATGGAAAAATTTGCGGCTAGCCGACTTAACGGTGCTCCTCCAGGTTATGTTGGATATGATGAGGGCGGTGAGTTGACAG
AAAAAGTTCGTAATAAGCCTTACTCAGTTCTTCTCTTTGACGAGGTGGAAAAGGCTCACCCAGATATTTTCAATATTCTC
TTACAGGTTTTGGATGACGGTGTCTTGACAGATAGTCGAGGTCGTAAAGTTGACTTCTCAAATACCATTATCATTATGAC
TTCGAACTTGGGAGCGACTGCTCTTCGTGATGATAAGACCGTTGGTTTTGGAGTCCAAGACATTTCTCATAATCACCAAG
CTATGCAGTCACGTATCATGGAAGAGCTTAAGAAGGCCTACCGACCAGAGTTTATCAACCGTATTGATGAAAAGGTTGTC
TTCCATAGTTTAGAGGAAGAGCAGCTTCGTGAGATTGTCAAGATTATGGTAAAACCGTTGGTATCAGCTTTGGCTGAAAA
AGGGATTGACTTGAAATTCCAACCAGCTGCCCTCAAACATTTAGCTAAAGATGGCTATGATGTTGAGATGGGTGCTCGTC
CATTACGTCGCACGATTCAAACTCAGGTGGAGGATAAGTTATCTGAGCTCTTACTAGGTGGCCAAGTAGTTAGTGGACAA
ACCCTTAAGATTGGATGCTCGAAAGATAAATTAACCTTTACAGTAGTGTAA
ATGACGACATATTCAAGAAAAATGCAGGCCATTTTCCATCGTGCGCAGCTTGAGGCAGAGCGTTTTGGAAGTCCTTTTCT
GGAGACTTGGCATGTGCTTCTGGCTATGGTTGAGGTTCCAGGATCTGTAGCCTACCTAACATTTACTGATTTTGAGGACC
GTATTCGTGCGGAAGAGATTGAGACAGCCGCTGTACTAGCGATGGAGAAAAGTCCAAAAGACTTGTCTGAATCAGATATT
ATCGATTTACGTGCACAGTCACATGCTTTAGAGGCTATGTTGCAAGAGGCAGAGGGAATTGCTGGTGTGACTGGTGCTGT
AGAGGTAGGGTCTGAACATGTATTGATGGCCTTTCTCCTTCATAAGGATTTGATGGTTTGTCGTCTCCTTGAAGTTGCTG
GTTTTCAATATAAGGATGACAGTGATAAGCCTCGCATTATCGATTTACGACGTTCTTTGGAGCGTTACGCAGGTCTTAGT
AAGCAAGACTTGAAGGCCATTCATGACCTTCGTAAGCCTAAAAAATCAAAGGCATCAGGAAATTTTGCTAATATGATGCA
GCCTCCCCAATCTTCTACTGGGGAACTGTCAGATTATACCAAGGACTTAACGGCTGTAGCCGAGTCAGGTGCTCTTGATC
CTGTTATTGGACGTGAGAAAGAAATTTCACGCATGATTCAGGTTTTGAGTCGTAAAACGAAGAATAACCCAGTTCTTGTT
GGTGAAGCAGGTGTTGGTAAGACGGCACTGGCGCTTGGCTTGGCACAGCGTATTGCTTCAGGCGAAGTACCTTTTGAGCT
GGCTGATATGCGTATCTTAGAGCTTGATATGATGAGTGTGGTTGCAGGAACACGTTTCCGTGGTGATTTCGAAGAACGTA
TGAATCAAATCATCGATGAGATTGAAGCTGATGGAAAAATCATTCTCTTTATTGACGAACTGCATACGATTATTGGTTCT
GGTTCAGGTATTGATAGTACCTTAGATGCGGCAAATATTTTGAAACCTGCTCTAGCTCGTGGAACCCTTCATATGGTTGG
AGCTACCACTCAAGCAGAGTATCAAAAGCATATTGAGAAAGATGCAGCTCTTTCTCGTCGTTTTGCTAAGATTACAATTG
AGGAGCCAAGTGTAGCTGAGGCGATTGATATTCTAAAAGGCCTACGTTCGTCTTATGAAGACTATCATCGTGTAACGATT
ACTGATGAAGCGGTTGAGACAGCGGTCAAGGCGGCGCATCGTTATTTGACGAGTAAAAACTTACCTGACTCTGCCATTGA
CCTTTTAGATGAAGCGAGTGCGACTGTTCAAGGTCGTATTAAAAAAGAAGCCAAACGTGAGATAACGCCTTTGGATGAAG
CGCTTCTATCTGGTGATATGAAGGCTGCTGTTAAACAATATAAGGCTAGCCAAAAAGCAAAATTACCAAAACCTGCCTTG
GTAGATGCGGATCAGATTATGCAAACCCTTAGTCGTCTATCAGGTATCCCTGTTGAGAAGATGACTCAGGCAGATAGCAA
GCGTTACTTAAATCTGGAAGCAGAGCTTCACAAACGTGTTATTGGTCAAGACGAGGCAGTTTCAGCGATTAGTCGTGCTA
TTCGTCGTAACCAGTCAGGTATTCGTACTGGAAAACGTCCTATTGGTTCCTTCATGTTCCTTGGACCTACTGGTGTTGGT
AAGACAGAATTGGCCAAGGCATTGGCGGAAGTTCTCTTTGATGATGAGTCATCTTTGCTTCGCTTTGACATGTCAGAATA
CATGGAAAAATTTGCGGCTAGCCGACTTAACGGTGCTCCTCCAGGTTATGTTGGATATGATGAGGGCGGTGAGTTGACAG
AAAAAGTTCGTAATAAGCCTTACTCAGTTCTTCTCTTTGACGAGGTGGAAAAGGCTCACCCAGATATTTTCAATATTCTC
TTACAGGTTTTGGATGACGGTGTCTTGACAGATAGTCGAGGTCGTAAAGTTGACTTCTCAAATACCATTATCATTATGAC
TTCGAACTTGGGAGCGACTGCTCTTCGTGATGATAAGACCGTTGGTTTTGGAGTCCAAGACATTTCTCATAATCACCAAG
CTATGCAGTCACGTATCATGGAAGAGCTTAAGAAGGCCTACCGACCAGAGTTTATCAACCGTATTGATGAAAAGGTTGTC
TTCCATAGTTTAGAGGAAGAGCAGCTTCGTGAGATTGTCAAGATTATGGTAAAACCGTTGGTATCAGCTTTGGCTGAAAA
AGGGATTGACTTGAAATTCCAACCAGCTGCCCTCAAACATTTAGCTAAAGATGGCTATGATGTTGAGATGGGTGCTCGTC
CATTACGTCGCACGATTCAAACTCAGGTGGAGGATAAGTTATCTGAGCTCTTACTAGGTGGCCAAGTAGTTAGTGGACAA
ACCCTTAAGATTGGATGCTCGAAAGATAAATTAACCTTTACAGTAGTGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus thermophilus LMG 18311 |
95.098 |
100 |
0.951 |
| clpC | Streptococcus thermophilus LMD-9 |
94.975 |
100 |
0.95 |
| clpC | Streptococcus mutans UA159 |
72.794 |
100 |
0.728 |
| clpC | Streptococcus pneumoniae TIGR4 |
67.157 |
100 |
0.672 |
| clpC | Streptococcus pneumoniae Rx1 |
67.157 |
100 |
0.672 |
| clpC | Streptococcus pneumoniae D39 |
67.157 |
100 |
0.672 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.421 |
100 |
0.513 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
47.631 |
100 |
0.48 |
| clpE | Streptococcus mutans UA159 |
48.243 |
76.716 |
0.37 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
44.885 |
80.27 |
0.36 |