Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   V6U67_RS07870 Genome accession   NZ_CP145865
Coordinates   1733502..1734233 (-) Length   243 a.a.
NCBI ID   WP_048674716.1    Uniprot ID   A0AB37DBL9
Organism   Streptococcus salivarius strain KSS8     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1728502..1739233
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U67_RS07845 (V6U67_07855) - 1729570..1730751 (+) 1182 WP_272125629.1 NAD(P)/FAD-dependent oxidoreductase -
  V6U67_RS07855 (V6U67_07865) trmB 1730968..1731609 (-) 642 WP_073687300.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  V6U67_RS07860 (V6U67_07870) ccrZ 1731619..1732410 (-) 792 WP_002884270.1 cell cycle regulator CcrZ -
  V6U67_RS07865 (V6U67_07875) pptB 1732468..1733505 (-) 1038 WP_048790351.1 ABC transporter permease Regulator
  V6U67_RS07870 (V6U67_07880) pptA 1733502..1734233 (-) 732 WP_048674716.1 ABC transporter ATP-binding protein Regulator
  V6U67_RS07875 (V6U67_07885) - 1734298..1734717 (+) 420 WP_048790350.1 HIT family protein -
  V6U67_RS07880 (V6U67_07890) - 1734714..1735013 (+) 300 WP_272125628.1 hypothetical protein -
  V6U67_RS07885 (V6U67_07895) - 1735384..1737489 (-) 2106 WP_070579628.1 AAA family ATPase -
  V6U67_RS07890 (V6U67_07900) - 1738205..1738459 (-) 255 WP_014634942.1 Txe/YoeB family addiction module toxin -
  V6U67_RS07895 (V6U67_07905) - 1738463..1738717 (-) 255 WP_013991075.1 type II toxin-antitoxin system Phd/YefM family antitoxin -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26846.09 Da        Isoelectric Point: 4.4799

>NTDB_id=940664 V6U67_RS07870 WP_048674716.1 1733502..1734233(-) (pptA) [Streptococcus salivarius strain KSS8]
MLKLEKVTGGYANIPVLKDVTFEVADGELVGLIGLNGAGKSTTINEIIGLLTPYGGQIAIDGLTIQQDSASYRQKIGYIP
ETPSLYEELTLREHLETVLMAYGLDVTEGMARADKYLKLFRLDEKLDWFPTQFSKGMKQKVMIICAFIVNPSLFIVDEPF
LGLDPLAISDLIELLAEEKAKGKAILMSTHVLDSAEKMCDRFVILHHGQVLAQGTLEELRQTFGDDSASLNDIYMQLTKG
ELS

Nucleotide


Download         Length: 732 bp        

>NTDB_id=940664 V6U67_RS07870 WP_048674716.1 1733502..1734233(-) (pptA) [Streptococcus salivarius strain KSS8]
ATGCTTAAATTAGAAAAGGTGACGGGTGGTTACGCTAATATTCCCGTCCTAAAAGATGTGACTTTTGAGGTGGCTGATGG
TGAATTAGTTGGTCTCATTGGTCTTAATGGTGCTGGGAAATCAACAACAATTAACGAGATTATTGGTCTCTTAACACCTT
ATGGGGGACAGATTGCCATTGATGGGTTAACTATTCAACAAGATTCAGCTAGCTATCGTCAGAAGATTGGCTATATTCCT
GAAACGCCAAGTCTCTATGAAGAGTTGACGCTTCGTGAACATTTGGAAACGGTGTTGATGGCCTATGGTCTTGATGTGAC
TGAGGGGATGGCACGTGCGGACAAGTACCTCAAACTCTTTCGCTTAGATGAAAAGTTAGATTGGTTCCCGACTCAGTTTT
CAAAGGGAATGAAGCAGAAGGTTATGATTATCTGTGCCTTTATTGTTAACCCCAGTCTTTTCATTGTTGATGAACCCTTC
TTGGGTTTGGATCCCTTGGCAATCTCCGACCTAATTGAGCTTTTAGCTGAGGAAAAAGCTAAGGGCAAGGCGATTCTCAT
GTCTACCCACGTTTTGGATTCAGCTGAGAAGATGTGTGATCGCTTTGTGATCTTGCATCACGGTCAAGTCTTAGCACAGG
GGACTCTCGAGGAGCTCCGTCAGACTTTTGGCGACGATAGTGCTAGTCTTAACGATATCTACATGCAGTTAACTAAGGGA
GAATTGTCATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

99.177

100

0.992
  pptA Streptococcus thermophilus LMD-9

97.119

100

0.971