Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   V6U66_RS06895 Genome accession   NZ_CP145864
Coordinates   1512142..1512444 (-) Length   100 a.a.
NCBI ID   WP_049528689.1    Uniprot ID   A0AAW7PKV4
Organism   Streptococcus salivarius strain KSS7     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1507142..1517444
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U66_RS06885 (V6U66_06875) - 1507318..1508970 (-) 1653 WP_155164507.1 RNA-directed DNA polymerase -
  V6U66_RS06890 (V6U66_06880) - 1508988..1511978 (-) 2991 WP_410534432.1 type I restriction endonuclease subunit R -
  V6U66_RS06895 (V6U66_06885) HI0659 1512142..1512444 (-) 303 WP_049528689.1 helix-turn-helix domain-containing protein Machinery gene
  V6U66_RS06900 (V6U66_06890) - 1512446..1512799 (-) 354 WP_045001823.1 type II toxin-antitoxin system RelE/ParE family toxin -
  V6U66_RS06905 (V6U66_06895) - 1513037..1513801 (-) 765 WP_061652208.1 SDR family NAD(P)-dependent oxidoreductase -
  V6U66_RS06910 (V6U66_06900) - 1513816..1514988 (-) 1173 WP_138261746.1 Mbeg1-like protein -
  V6U66_RS06915 (V6U66_06905) - 1515098..1515724 (+) 627 WP_045771826.1 Pr6Pr family membrane protein -
  V6U66_RS06920 (V6U66_06910) - 1515762..1516604 (-) 843 WP_070578032.1 Cof-type HAD-IIB family hydrolase -
  V6U66_RS06925 (V6U66_06915) - 1516756..1517145 (+) 390 WP_221739328.1 sodium transporter -

Sequence

Protein


Download         Length: 100 a.a.        Molecular weight: 10964.95 Da        Isoelectric Point: 9.7589

>NTDB_id=940588 V6U66_RS06895 WP_049528689.1 1512142..1512444(-) (HI0659) [Streptococcus salivarius strain KSS7]
MTLEKNPAIGSSWDDLQKTIFTKEEIAASELRVALMLEIIDARKKQGISQKKLEELSGVKQPVIARMEIGKTAPQLDTVL
KILASLGKTLAVVPLDSHVK

Nucleotide


Download         Length: 303 bp        

>NTDB_id=940588 V6U66_RS06895 WP_049528689.1 1512142..1512444(-) (HI0659) [Streptococcus salivarius strain KSS7]
ATGACCCTAGAAAAGAATCCAGCAATTGGAAGTAGTTGGGATGATTTACAGAAAACTATTTTCACTAAAGAGGAAATTGC
GGCGAGTGAACTCCGTGTCGCACTGATGCTTGAGATTATTGATGCTCGTAAAAAACAAGGCATTTCCCAAAAGAAACTTG
AAGAGTTAAGTGGTGTCAAACAACCTGTTATCGCACGTATGGAGATAGGTAAAACAGCACCTCAGTTAGATACGGTTCTT
AAAATACTGGCGAGTCTAGGTAAGACATTGGCGGTAGTCCCACTTGATTCACATGTGAAGTAA

Domains

Predicted by InterproScan.

Helix-turn-helix (HTH_3)

(41-91)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

60.92

87

0.53