Detailed information NTG0940533

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: V6U65_RS09115
• Genome accession: NZ_CP145863
• Coordinates: 1981870..1983231 (-)
• Length: 453 a.a.
• NCBI ID: WP_081051385.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain KSS6
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1976870..1988231

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6U65_RS09090 (V6U65_09085)	rplA	1978605..1979294 (-)	690	WP_002885800.1	50S ribosomal protein L1	-
V6U65_RS09095 (V6U65_09090)	rplK	1979394..1979819 (-)	426	WP_002885648.1	50S ribosomal protein L11	-
V6U65_RS09100 (V6U65_09095)	-	1979991..1980344 (+)	354	WP_002885872.1	DUF3397 domain-containing protein	-
V6U65_RS09105 (V6U65_09100)	-	1980440..1980937 (-)	498	WP_002885818.1	beta-class carbonic anhydrase	-
V6U65_RS09110 (V6U65_09105)	-	1981088..1981783 (-)	696	WP_002885783.1	TIGR00266 family protein	-
V6U65_RS09115 (V6U65_09110)	radA	1981870..1983231 (-)	1362	WP_081051385.1	DNA repair protein RadA	Machinery gene
V6U65_RS09120 (V6U65_09115)	-	1983228..1983695 (-)	468	WP_070655758.1	isochorismatase family cysteine hydrolase	-
V6U65_RS09125 (V6U65_09120)	-	1983706..1984152 (-)	447	WP_045769395.1	dUTP diphosphatase	-
V6U65_RS09130 (V6U65_09125)	-	1984362..1984964 (+)	603	WP_014635095.1	NADPH-dependent FMN reductase	-
V6U65_RS09135 (V6U65_09130)	-	1984983..1986233 (+)	1251	WP_002885631.1	NAD(P)H-dependent oxidoreductase	-
V6U65_RS09140 (V6U65_09135)	-	1986350..1987141 (+)	792	WP_410532387.1	formate/nitrite transporter family protein	-
V6U65_RS09145 (V6U65_09140)	-	1987150..1987710 (+)	561	WP_410532388.1	MptD family putative ECF transporter S component	-

Sequence

Protein

• Length: 453 a.a.
• Molecular weight: 49477.89 Da
• Isoelectric Point: 6.6528

>NTDB_id=940533 V6U65_RS09115 WP_081051385.1 1981870..1983231(-) (radA) [Streptococcus salivarius strain KSS6]
MAKKKSTFVCRECGYNSPKYLGRCPNCSSWSSFEEEVEVQEVKNARVSLTGEKSKPTKLKEVSSINYARIKTDMDEFNRV
LGGGVVPGSLVLIGGDPGIGKSTLLLQVSTQLANKGTVLYVSGEESAEQIKLRSERLGDIDNEFYLYAETNMQAVRSQVE
AIKPDFLIIDSIQTIMSPEISGVQGSVSQVREVTAELMQIAKTNNIATFIVGHVTKEGQLAGPRMLEHMVDTVLYFEGER
HHTFRILRAVKNRFGSTNEIGIFEMQSGGLVEVLNPSQVFLEERLDGATGSAIVVTMEGSRPILAEVQALVTPTVFGNAK
RTTTGLDFNRVSLIMAVLEKRCGLLLQNQDAYLKSAGGVKLDEPAIDLAVAVAIASSYKELPTNPQEAFIGEIGLTGEIR
RVTRIEQRINEAAKLGFTKIYVPKNSLHGMKIPEGIQVVGVTTVGEVLKKVFS

Nucleotide

• Length: 1362 bp

>NTDB_id=940533 V6U65_RS09115 WP_081051385.1 1981870..1983231(-) (radA) [Streptococcus salivarius strain KSS6]
ATAGCTAAGAAAAAATCAACTTTTGTTTGTCGAGAATGTGGCTACAATTCACCCAAATATCTAGGGCGTTGCCCCAACTG
TTCTTCTTGGTCCTCTTTTGAGGAAGAAGTTGAGGTGCAGGAGGTGAAAAATGCTCGTGTCAGTTTGACGGGTGAAAAGT
CCAAACCTACTAAATTAAAAGAAGTCTCTTCAATTAATTATGCCCGCATAAAGACTGACATGGACGAGTTTAACCGTGTT
CTAGGTGGCGGTGTGGTTCCGGGTAGCCTGGTTCTTATTGGAGGAGATCCAGGTATAGGGAAATCGACTCTCCTCTTACA
GGTGTCAACACAGTTAGCTAACAAGGGAACTGTCCTCTATGTATCTGGGGAAGAATCTGCCGAGCAAATCAAATTGCGGA
GCGAACGTTTAGGTGATATTGATAACGAATTTTATCTTTATGCTGAGACTAATATGCAAGCCGTTCGCAGCCAAGTAGAG
GCTATAAAACCCGATTTTCTCATTATCGACTCTATTCAGACCATCATGAGTCCAGAGATTTCTGGCGTTCAAGGTTCTGT
ATCTCAGGTTCGTGAAGTCACTGCTGAACTTATGCAGATTGCCAAAACCAATAACATCGCCACATTTATTGTTGGGCATG
TGACCAAGGAGGGACAACTGGCTGGACCACGTATGTTGGAACACATGGTGGATACTGTGCTCTATTTTGAGGGAGAACGT
CATCATACCTTCCGTATTTTGCGAGCAGTCAAAAACCGTTTTGGTTCAACCAATGAGATTGGGATTTTTGAGATGCAGTC
TGGTGGTTTGGTAGAAGTGCTAAATCCTAGCCAAGTTTTCTTAGAGGAACGTCTAGACGGAGCCACAGGTTCTGCCATTG
TTGTGACAATGGAAGGTAGCAGACCTATCTTAGCTGAAGTTCAAGCCTTGGTGACCCCAACCGTCTTTGGTAATGCCAAG
CGGACAACAACAGGACTGGATTTTAACCGCGTCAGCCTCATTATGGCTGTTTTAGAGAAACGTTGTGGCCTTCTTCTCCA
AAATCAAGATGCTTATTTAAAATCAGCTGGTGGTGTCAAATTGGACGAGCCGGCTATTGACCTTGCTGTTGCCGTTGCCA
TTGCTTCTAGTTACAAGGAGCTTCCAACCAATCCACAAGAAGCCTTTATAGGAGAAATTGGCTTGACCGGAGAGATACGC
CGAGTAACTCGCATTGAACAGCGTATTAATGAAGCTGCTAAACTAGGTTTTACTAAGATTTATGTTCCCAAAAATTCTCT
GCACGGCATGAAAATTCCAGAAGGTATCCAGGTGGTTGGCGTTACGACAGTGGGAGAAGTACTCAAAAAAGTCTTTTCTT
AA

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (360-425)

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (8-35)

• AAA domain (AAA_25) (63-218)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Streptococcus pneumoniae Rx1	88.962	100	0.89
radA	Streptococcus pneumoniae D39	88.962	100	0.89
radA	Streptococcus pneumoniae R6	88.962	100	0.89
radA	Streptococcus pneumoniae TIGR4	88.962	100	0.89
radA	Streptococcus mitis NCTC 12261	88.962	100	0.89
radA	Streptococcus mitis SK321	88.962	100	0.89
radA	Bacillus subtilis subsp. subtilis str. 168	61.369	100	0.614