Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   V6T01_RS08370 Genome accession   NZ_CP145856
Coordinates   1818710..1819786 (-) Length   358 a.a.
NCBI ID   WP_060972563.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS1     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1813710..1824786
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6T01_RS08345 (V6T01_08320) - 1814468..1814788 (+) 321 WP_013991101.1 hypothetical protein -
  V6T01_RS08350 (V6T01_08325) - 1814821..1816887 (-) 2067 WP_410541335.1 cation:proton antiporter -
  V6T01_RS08355 (V6T01_08330) - 1816896..1817138 (-) 243 WP_179969538.1 hypothetical protein -
  V6T01_RS08360 (V6T01_08335) - 1817135..1817683 (-) 549 WP_410541334.1 tRNA (mnm(5)s(2)U34)-methyltransferase -
  V6T01_RS08365 (V6T01_08340) - 1817680..1818624 (-) 945 WP_002891699.1 TIGR01212 family radical SAM protein -
  V6T01_RS08370 (V6T01_08345) sepM 1818710..1819786 (-) 1077 WP_060972563.1 SepM family pheromone-processing serine protease Regulator
  V6T01_RS08375 (V6T01_08350) coaD 1819764..1820261 (-) 498 WP_021143683.1 pantetheine-phosphate adenylyltransferase -
  V6T01_RS08380 (V6T01_08355) rsmD 1820294..1820842 (-) 549 WP_080571436.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  V6T01_RS08385 (V6T01_08360) trxB 1820984..1821904 (-) 921 WP_410541333.1 thioredoxin-disulfide reductase -
  V6T01_RS08390 (V6T01_08365) - 1821970..1822194 (-) 225 WP_002884393.1 DUF4059 family protein -
  V6T01_RS08395 (V6T01_08370) - 1822406..1823149 (-) 744 WP_002884313.1 amino acid ABC transporter ATP-binding protein -
  V6T01_RS08400 (V6T01_08375) - 1823149..1823895 (-) 747 WP_095559509.1 amino acid ABC transporter permease -

Sequence


Protein


Download         Length: 358 a.a.        Molecular weight: 39062.81 Da        Isoelectric Point: 9.2472

>NTDB_id=940200 V6T01_RS08370 WP_060972563.1 1818710..1819786(-) (sepM) [Streptococcus salivarius strain KSS1]
MANKNESKSLLGKIWRIKWWLLSIFTVLFLLFSLFFPLNNYYVELPGGAFDTKEVLTVDKKADDSKGSYNFVAVAQTKAT
LALMLYAQLNDFAKLQTAEEATGNYSDEDFMRINQFYMETSQNQAIYQGLTLAGKEASLEYMGVYVLQVADDSSFKGVLN
IADTVTAVNGKTFDNSTDLIKYVQGLKLGSKVKVTYMTEDKEKTATGKIIKIANGKNGIGIGLTDHTEVKSPENVKFKLD
GVGGPSAGLMFTLAIYDQVSGQDLKAGRKIAGTGTIEKDGAVGDIGGAYLKVKSAADSGADIFFVPNNPVTKEMKKADPD
AKTNYQEAKEAAKKLGTKMKIVPVKTAQEAIDYLKKTK

Nucleotide


Download         Length: 1077 bp        

>NTDB_id=940200 V6T01_RS08370 WP_060972563.1 1818710..1819786(-) (sepM) [Streptococcus salivarius strain KSS1]
GTGGCAAACAAGAACGAATCTAAATCACTATTAGGGAAAATTTGGCGTATTAAGTGGTGGTTGCTAAGTATTTTTACGGT
ACTTTTCCTCCTCTTTTCCCTCTTTTTCCCGCTAAATAATTATTATGTTGAGCTTCCGGGTGGTGCTTTTGATACTAAGG
AAGTTTTGACTGTAGATAAGAAAGCTGATGATTCAAAAGGATCCTACAATTTTGTGGCGGTGGCTCAAACCAAGGCAACT
TTGGCCCTCATGCTCTATGCTCAGCTTAATGATTTTGCAAAGCTTCAAACAGCTGAAGAGGCGACTGGAAATTACTCTGA
TGAAGATTTCATGCGTATCAATCAATTCTACATGGAGACTTCCCAAAACCAGGCGATTTATCAGGGCTTGACTCTGGCTG
GTAAGGAGGCTAGCTTGGAGTATATGGGTGTTTATGTGCTTCAGGTGGCTGATGATTCTAGTTTCAAGGGTGTCCTTAAT
ATTGCGGATACGGTGACAGCTGTCAATGGCAAGACCTTTGATAATTCTACTGACTTGATTAAATACGTCCAAGGACTTAA
GTTGGGTTCAAAAGTCAAGGTCACTTATATGACAGAGGACAAAGAAAAGACTGCCACTGGTAAGATTATTAAGATTGCTA
ATGGTAAAAATGGTATTGGTATCGGCTTAACGGACCATACCGAGGTCAAGAGTCCTGAAAACGTGAAGTTTAAACTTGAT
GGTGTTGGTGGACCAAGTGCGGGGCTTATGTTTACTTTGGCTATTTACGATCAGGTGTCTGGTCAAGACCTCAAGGCTGG
CCGTAAAATTGCTGGAACAGGCACTATTGAAAAGGACGGGGCTGTCGGTGATATCGGTGGGGCCTACCTCAAGGTGAAAT
CAGCGGCTGATAGTGGCGCAGATATTTTCTTCGTGCCAAATAATCCAGTAACTAAGGAAATGAAAAAGGCTGATCCGGAT
GCTAAGACTAATTATCAAGAGGCTAAGGAAGCTGCCAAGAAACTGGGGACCAAGATGAAAATCGTTCCTGTTAAAACAGC
TCAAGAAGCCATTGATTATTTGAAAAAGACTAAGTAA

Domains


Predicted by InterproScan.

(142-206)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

65.103

95.251

0.62