Detailed information NTG0940129

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: V6Z34_RS18005
• Genome accession: NZ_CP145817
• Coordinates: 3595388..3596551 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain WH-7
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3590388..3601551

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6Z34_RS17975	-	3590653..3591072 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
V6Z34_RS17980	comFC	3591146..3591835 (-)	690	WP_196616643.1	phosphoribosyltransferase family protein	Machinery gene
V6Z34_RS17985	-	3591841..3592125 (-)	285	WP_022553866.1	late competence development ComFB family protein	-
V6Z34_RS17990	comFA	3592183..3593568 (-)	1386	WP_057080261.1	DEAD/DEAH box helicase	Machinery gene
V6Z34_RS17995	-	3593676..3594524 (-)	849	WP_243662308.1	DegV family protein	-
V6Z34_RS18000	degU	3594622..3595311 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
V6Z34_RS18005	degS	3595388..3596551 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
V6Z34_RS18010	-	3596773..3597420 (+)	648	WP_003151384.1	YigZ family protein	-
V6Z34_RS18015	-	3597425..3598639 (+)	1215	WP_003151383.1	LCP family protein	-
V6Z34_RS18020	-	3598729..3599805 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
V6Z34_RS18025	tuaH	3599938..3601134 (-)	1197	WP_079004918.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=940129 V6Z34_RS18005 WP_003151385.1 3595388..3596551(-) (degS) [Bacillus velezensis strain WH-7]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=940129 V6Z34_RS18005 WP_003151385.1 3595388..3596551(-) (degS) [Bacillus velezensis strain WH-7]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGGGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCTACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948