Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   V6Z34_RS07040 Genome accession   NZ_CP145817
Coordinates   1371291..1371887 (+) Length   198 a.a.
NCBI ID   WP_003154591.1    Uniprot ID   -
Organism   Bacillus velezensis strain WH-7     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1366291..1376887
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6Z34_RS07010 - 1366505..1366960 (+) 456 WP_003154599.1 flavodoxin -
  V6Z34_RS07015 dapD 1367042..1367752 (+) 711 WP_406618146.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  V6Z34_RS07020 - 1367823..1368947 (+) 1125 WP_014304923.1 N-acetyldiaminopimelate deacetylase -
  V6Z34_RS07025 - 1369008..1369253 (+) 246 WP_003154596.1 YkuS family protein -
  V6Z34_RS07030 - 1369287..1370093 (-) 807 WP_003154595.1 mechanosensitive ion channel family protein -
  V6Z34_RS07035 - 1370381..1370839 (+) 459 WP_014304924.1 TlpA disulfide reductase family protein -
  V6Z34_RS07040 rok 1371291..1371887 (+) 597 WP_003154591.1 transcriptional regulator Rok Regulator
  V6Z34_RS07045 - 1371908..1372900 (-) 993 WP_014304925.1 hypothetical protein -
  V6Z34_RS07050 - 1373046..1373648 (+) 603 WP_003154587.1 molybdenum cofactor guanylyltransferase -
  V6Z34_RS07055 - 1373700..1374719 (+) 1020 WP_003154586.1 molybdopterin-synthase adenylyltransferase MoeB -
  V6Z34_RS07060 glp 1374737..1376026 (+) 1290 WP_406618150.1 gephyrin-like molybdotransferase Glp -
  V6Z34_RS07065 mobB 1375990..1376511 (+) 522 WP_063174790.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22525.57 Da        Isoelectric Point: 9.6909

>NTDB_id=940090 V6Z34_RS07040 WP_003154591.1 1371291..1371887(+) (rok) [Bacillus velezensis strain WH-7]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=940090 V6Z34_RS07040 WP_003154591.1 1371291..1371887(+) (rok) [Bacillus velezensis strain WH-7]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACGGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCGCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843