Detailed information NTG0939954

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACE168_RS20145
• Genome accession: NZ_CP169634
• Coordinates: 4109840..4110865 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli str. K-12 substr. MG1655 strain K-12
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4104840..4115865

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACE168_RS20115 (ACE168_20115)	zapB	4104924..4105169 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
ACE168_RS20120 (ACE168_20120)	rraA	4105254..4105739 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACE168_RS20125 (ACE168_20125)	menA	4105832..4106758 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACE168_RS20130 (ACE168_20130)	hslU	4106825..4108156 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ACE168_RS20135 (ACE168_20135)	hslV	4108166..4108696 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACE168_RS20140 (ACE168_20140)	ftsN	4108789..4109748 (-)	960	WP_000068828.1	cell division protein FtsN	-
ACE168_RS20145 (ACE168_20145)	cytR	4109840..4110865 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACE168_RS20150 (ACE168_20150)	priA	4111021..4113219 (-)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
ACE168_RS20155 (ACE168_20155)	rpmE	4113422..4113634 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
ACE168_RS20160 (ACE168_20160)	yiiX	4113695..4114303 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
ACE168_RS20165 (ACE168_20165)	metJ	4114487..4114804 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=939954 ACE168_RS20145 WP_000644904.1 4109840..4110865(-) (cytR) [Escherichia coli str. K-12 substr. MG1655 strain K-12]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=939954 ACE168_RS20145 WP_000644904.1 4109840..4110865(-) (cytR) [Escherichia coli str. K-12 substr. MG1655 strain K-12]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628