Detailed information NTG0939790

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACE169_RS20025
• Genome accession: NZ_CP169632
• Coordinates: 4089127..4090152 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain L-formLTE
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4084127..4095152

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACE169_RS19995 (ACE169_19995)	zapB	4084211..4084456 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
ACE169_RS20000 (ACE169_20000)	rraA	4084541..4085026 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACE169_RS20005 (ACE169_20005)	menA	4085119..4086045 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACE169_RS20010 (ACE169_20010)	hslU	4086112..4087443 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ACE169_RS20015 (ACE169_20015)	hslV	4087453..4087983 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACE169_RS20020 (ACE169_20020)	ftsN	4088076..4089035 (-)	960	WP_000068828.1	cell division protein FtsN	-
ACE169_RS20025 (ACE169_20025)	cytR	4089127..4090152 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACE169_RS20030 (ACE169_20030)	priA	4090308..4092506 (-)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
ACE169_RS20035 (ACE169_20035)	rpmE	4092709..4092921 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
ACE169_RS20040 (ACE169_20040)	yiiX	4092982..4093590 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
ACE169_RS20045 (ACE169_20045)	metJ	4093774..4094091 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=939790 ACE169_RS20025 WP_000644904.1 4089127..4090152(-) (cytR) [Escherichia coli strain L-formLTE]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=939790 ACE169_RS20025 WP_000644904.1 4089127..4090152(-) (cytR) [Escherichia coli strain L-formLTE]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628