Detailed information
Bioinformatically predicted
Overview
| Name | nin/comJ | Type | Regulator |
| Locus tag | V6D45_RS01960 | Genome accession | NZ_CP145722 |
| Coordinates | 366807..367205 (-) | Length | 132 a.a. |
| NCBI ID | WP_014112613.1 | Uniprot ID | G4NQU8 |
| Organism | Bacillus spizizenii strain kcgeb_S11 | ||
| Function | represses the expression of nucA (predicted from homology) Competence regulation |
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Genomic Context
Location: 361807..372205
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V6D45_RS01925 (V6D45_01925) | - | 362641..362777 (+) | 137 | Protein_335 | hypothetical protein | - |
| V6D45_RS01930 (V6D45_01930) | - | 362774..363229 (+) | 456 | WP_003224877.1 | RDD family protein | - |
| V6D45_RS01935 (V6D45_01935) | - | 363312..363644 (+) | 333 | WP_014112608.1 | YckD family protein | - |
| V6D45_RS01940 (V6D45_01940) | - | 363779..364201 (+) | 423 | WP_088680288.1 | MarR family transcriptional regulator | - |
| V6D45_RS01945 (V6D45_01945) | - | 364189..364517 (+) | 329 | Protein_339 | DUF3147 family protein | - |
| V6D45_RS01950 (V6D45_01950) | - | 364537..365265 (+) | 729 | WP_268391405.1 | AAA family ATPase | - |
| V6D45_RS01955 (V6D45_01955) | bglC | 365338..366771 (+) | 1434 | WP_090557351.1 | 6-phospho-beta-glucosidase | - |
| V6D45_RS01960 (V6D45_01960) | nin/comJ | 366807..367205 (-) | 399 | WP_014112613.1 | DNA-entry nuclease inhibitor | Regulator |
| V6D45_RS01965 (V6D45_01965) | nucA/comI | 367228..367677 (-) | 450 | WP_120698809.1 | DNA-entry nuclease | Machinery gene |
| V6D45_RS01970 (V6D45_01970) | tlpC | 367851..369575 (-) | 1725 | WP_338443736.1 | methyl-accepting chemotaxis protein TlpC | - |
| V6D45_RS01975 (V6D45_01975) | hxlB | 369687..370244 (-) | 558 | WP_338443737.1 | 6-phospho-3-hexuloisomerase | - |
| V6D45_RS01980 (V6D45_01980) | hxlA | 370249..370881 (-) | 633 | WP_338443738.1 | 3-hexulose-6-phosphate synthase | - |
| V6D45_RS01985 (V6D45_01985) | hxlR | 371113..371475 (+) | 363 | WP_014112618.1 | transcriptional activator HxlR | - |
Sequence
Protein
Download Length: 132 a.a. Molecular weight: 14922.90 Da Isoelectric Point: 4.6034
>NTDB_id=939646 V6D45_RS01960 WP_014112613.1 366807..367205(-) (nin/comJ) [Bacillus spizizenii strain kcgeb_S11]
MIKSWKPQELSISYHQFTVFQKDSAPPVMDWTDEAIEKGFAAADGAISFEAQRNTKAFILLRLNSSETVNSYEKKVTVPF
HVTENGIEIESIMSKRLSFDLPKGEYQLTCWTVPAEMSDLHADTYIIDAVSV
MIKSWKPQELSISYHQFTVFQKDSAPPVMDWTDEAIEKGFAAADGAISFEAQRNTKAFILLRLNSSETVNSYEKKVTVPF
HVTENGIEIESIMSKRLSFDLPKGEYQLTCWTVPAEMSDLHADTYIIDAVSV
Nucleotide
Download Length: 399 bp
>NTDB_id=939646 V6D45_RS01960 WP_014112613.1 366807..367205(-) (nin/comJ) [Bacillus spizizenii strain kcgeb_S11]
TTGATCAAGTCATGGAAACCTCAAGAACTGTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTGCACCTCC
TGTTATGGATTGGACTGACGAAGCGATCGAAAAAGGATTCGCAGCGGCGGACGGAGCGATTTCGTTTGAGGCACAGAGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACTGTAAACTCCTACGAAAAGAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTGAAATTGAAAGCATTATGTCTAAAAGGCTGTCCTTTGATCTTCCTAAAGGAGAATATCA
ATTGACATGCTGGACTGTGCCGGCTGAGATGTCAGATCTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA
TTGATCAAGTCATGGAAACCTCAAGAACTGTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTGCACCTCC
TGTTATGGATTGGACTGACGAAGCGATCGAAAAAGGATTCGCAGCGGCGGACGGAGCGATTTCGTTTGAGGCACAGAGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACTGTAAACTCCTACGAAAAGAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTGAAATTGAAAGCATTATGTCTAAAAGGCTGTCCTTTGATCTTCCTAAAGGAGAATATCA
ATTGACATGCTGGACTGTGCCGGCTGAGATGTCAGATCTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nin/comJ | Bacillus subtilis subsp. subtilis str. 168 |
96.212 |
100 |
0.962 |