Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | R8634_RS03105 | Genome accession | NZ_AP028381 |
| Coordinates | 596613..596996 (+) | Length | 127 a.a. |
| NCBI ID | WP_002852281.1 | Uniprot ID | Q9PHN2 |
| Organism | Campylobacter jejuni strain BCH-11000 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 591613..601996
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8634_RS03085 (B11000_06140) | - | 591692..593626 (-) | 1935 | WP_317656482.1 | RNB domain-containing ribonuclease | - |
| R8634_RS03090 (B11000_06150) | ilvC | 593745..594767 (+) | 1023 | WP_032581040.1 | ketol-acid reductoisomerase | - |
| R8634_RS03095 (B11000_06160) | - | 594771..595853 (+) | 1083 | WP_032581039.1 | divergent polysaccharide deacetylase family protein | - |
| R8634_RS03100 (B11000_06170) | dprA | 595843..596616 (+) | 774 | WP_002859984.1 | DNA-processing protein DprA | Machinery gene |
| R8634_RS03105 (B11000_06180) | dprB | 596613..596996 (+) | 384 | WP_002852281.1 | Holliday junction resolvase RuvX | Machinery gene |
| R8634_RS03110 (B11000_06190) | - | 597025..597864 (+) | 840 | WP_011049748.1 | RsmB/NOP family class I SAM-dependent RNA methyltransferase | - |
| R8634_RS03115 (B11000_06200) | msrA | 598040..598537 (-) | 498 | WP_002852283.1 | peptide-methionine (S)-S-oxide reductase MsrA | - |
| R8634_RS03120 (B11000_06210) | ppa | 598579..599097 (-) | 519 | WP_002867724.1 | inorganic diphosphatase | - |
| R8634_RS03125 (B11000_06220) | adk | 599107..599685 (-) | 579 | WP_002859580.1 | adenylate kinase | - |
| R8634_RS03130 (B11000_06230) | aspS | 599682..601433 (-) | 1752 | WP_002875506.1 | aspartate--tRNA ligase | - |
Sequence
Protein
Download Length: 127 a.a. Molecular weight: 14088.59 Da Isoelectric Point: 9.5433
>NTDB_id=93947 R8634_RS03105 WP_002852281.1 596613..596996(+) (dprB) [Campylobacter jejuni strain BCH-11000]
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
Nucleotide
Download Length: 384 bp
>NTDB_id=93947 R8634_RS03105 WP_002852281.1 596613..596996(+) (dprB) [Campylobacter jejuni strain BCH-11000]
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAGATTTCTTTAC
TCATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCCTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAGATTTCTTTAC
TCATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCCTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
44.882 |
100 |
0.449 |