Detailed information NTG0939190

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: ACEXP4_RS26970
• Genome accession: NZ_CP169522
• Coordinates: 5576613..5577638 (-)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa strain CIMT2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5571613..5582638

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACEXP4_RS26945 (ACEXP4_26945)	aroE	5571815..5572639 (-)	825	WP_003111201.1	shikimate dehydrogenase	-
ACEXP4_RS26950 (ACEXP4_26950)	hemF	5572697..5573614 (-)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
ACEXP4_RS26955 (ACEXP4_26955)	-	5573805..5574782 (+)	978	WP_003111202.1	NADPH:quinone reductase	-
ACEXP4_RS26960 (ACEXP4_26960)	-	5574792..5575349 (-)	558	WP_003097300.1	L-threonylcarbamoyladenylate synthase	-
ACEXP4_RS26965 (ACEXP4_26965)	dprA	5575390..5576478 (-)	1089	WP_016264002.1	DNA-processing protein DprA	Machinery gene
ACEXP4_RS26970 (ACEXP4_26970)	tsaP	5576613..5577638 (-)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
ACEXP4_RS26975 (ACEXP4_26975)	def	5577777..5578283 (+)	507	WP_003107059.1	peptide deformylase	-
ACEXP4_RS26980 (ACEXP4_26980)	fmt	5578338..5579282 (+)	945	WP_017001989.1	methionyl-tRNA formyltransferase	-
ACEXP4_RS26985 (ACEXP4_26985)	rsmB	5579279..5580583 (+)	1305	WP_003122291.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
ACEXP4_RS26990 (ACEXP4_26990)	trkA	5580611..5581984 (+)	1374	WP_003107053.1	Trk system potassium transporter TrkA	-
ACEXP4_RS26995 (ACEXP4_26995)	-	5582133..5582450 (+)	318	WP_003120685.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=939190 ACEXP4_RS26970 WP_003097294.1 5576613..5577638(-) (tsaP) [Pseudomonas aeruginosa strain CIMT2]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=939190 ACEXP4_RS26970 WP_003097294.1 5576613..5577638(-) (tsaP) [Pseudomonas aeruginosa strain CIMT2]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACACTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTATGCC
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393