Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | R8580_RS03030 | Genome accession | NZ_AP028380 |
| Coordinates | 586468..586851 (+) | Length | 127 a.a. |
| NCBI ID | WP_002852281.1 | Uniprot ID | Q9PHN2 |
| Organism | Campylobacter jejuni strain BCH-10998 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 581468..591851
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8580_RS03010 (B10998_05880) | - | 581547..583481 (-) | 1935 | WP_100644233.1 | RNB domain-containing ribonuclease | - |
| R8580_RS03015 (B10998_05890) | ilvC | 583600..584622 (+) | 1023 | WP_002866493.1 | ketol-acid reductoisomerase | - |
| R8580_RS03020 (B10998_05900) | - | 584626..585708 (+) | 1083 | WP_002876692.1 | divergent polysaccharide deacetylase family protein | - |
| R8580_RS03025 (B10998_05910) | dprA | 585698..586471 (+) | 774 | WP_063674954.1 | DNA-processing protein DprA | Machinery gene |
| R8580_RS03030 (B10998_05920) | dprB | 586468..586851 (+) | 384 | WP_002852281.1 | Holliday junction resolvase RuvX | Machinery gene |
| R8580_RS03035 (B10998_05930) | - | 586880..587719 (+) | 840 | WP_002866496.1 | RsmB/NOP family class I SAM-dependent RNA methyltransferase | - |
| R8580_RS03040 (B10998_05940) | msrA | 587895..588392 (-) | 498 | WP_002866497.1 | peptide-methionine (S)-S-oxide reductase MsrA | - |
| R8580_RS03045 (B10998_05950) | ppa | 588433..588951 (-) | 519 | WP_002855031.1 | inorganic diphosphatase | - |
| R8580_RS03050 (B10998_05960) | adk | 588961..589539 (-) | 579 | WP_002855137.1 | adenylate kinase | - |
| R8580_RS03055 (B10998_05970) | aspS | 589536..591287 (-) | 1752 | WP_012006668.1 | aspartate--tRNA ligase | - |
Sequence
Protein
Download Length: 127 a.a. Molecular weight: 14088.59 Da Isoelectric Point: 9.5433
>NTDB_id=93901 R8580_RS03030 WP_002852281.1 586468..586851(+) (dprB) [Campylobacter jejuni strain BCH-10998]
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
Nucleotide
Download Length: 384 bp
>NTDB_id=93901 R8580_RS03030 WP_002852281.1 586468..586851(+) (dprB) [Campylobacter jejuni strain BCH-10998]
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATTAAAAATTTACTTAAAATACATGAGATTTCTTTAC
TCATTGTTGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCTTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATTAAAAATTTACTTAAAATACATGAGATTTCTTTAC
TCATTGTTGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCTTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
44.882 |
100 |
0.449 |