Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ORY85_RS02040 Genome accession   NZ_CP145606
Coordinates   413901..414362 (-) Length   153 a.a.
NCBI ID   WP_274572343.1    Uniprot ID   -
Organism   Neisseria leonii strain 3986     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 408901..419362
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ORY85_RS02010 (ORY85_02010) - 408985..409122 (-) 138 WP_274572349.1 hypothetical protein -
  ORY85_RS02015 (ORY85_02015) - 409156..409659 (-) 504 WP_274572348.1 DUF1543 domain-containing protein -
  ORY85_RS02020 (ORY85_02020) - 409748..410614 (-) 867 WP_274572347.1 DMT family transporter -
  ORY85_RS02025 (ORY85_02025) - 410758..411213 (-) 456 WP_274572346.1 DMT family transporter -
  ORY85_RS02030 (ORY85_02030) prpC 411361..412509 (-) 1149 WP_274572345.1 2-methylcitrate synthase -
  ORY85_RS02035 (ORY85_02035) prpB 412594..413469 (-) 876 WP_274572344.1 methylisocitrate lyase -
  ORY85_RS02040 (ORY85_02040) recX 413901..414362 (-) 462 WP_274572343.1 recombination regulator RecX Regulator
  ORY85_RS02045 (ORY85_02045) - 414407..415117 (-) 711 WP_274572342.1 phosphoglycolate phosphatase -
  ORY85_RS02050 (ORY85_02050) hflX 415375..416490 (+) 1116 WP_274572387.1 GTPase HflX -
  ORY85_RS02055 (ORY85_02055) - 416593..417387 (+) 795 WP_274572341.1 M48 family metallopeptidase -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17280.59 Da        Isoelectric Point: 10.0890

>NTDB_id=939000 ORY85_RS02040 WP_274572343.1 413901..414362(-) (recX) [Neisseria leonii strain 3986]
MKPTKSLRSRALEILSRQEISRAELKKKLARHAESEEEIEAVINEFADRNWQSDERFAEAYIHSKSRRHGRLRLQQALAA
KGVGADIVAPLLPGRNEELAAAVGVLEKKFAAPADNPANKLKQMRFLAYRGFDADTVRRALKTAWQEDETENG

Nucleotide


Download         Length: 462 bp        

>NTDB_id=939000 ORY85_RS02040 WP_274572343.1 413901..414362(-) (recX) [Neisseria leonii strain 3986]
ATGAAACCGACCAAATCCCTGCGCAGCCGCGCCCTCGAAATCCTGTCGCGCCAAGAAATCAGCCGTGCCGAGCTGAAAAA
AAAACTGGCGCGCCATGCCGAAAGCGAGGAAGAAATCGAAGCCGTCATCAACGAATTTGCCGACCGCAACTGGCAGTCCG
ACGAACGCTTTGCCGAAGCCTATATCCACAGCAAAAGCCGCCGCCACGGCCGTCTGCGCCTGCAACAGGCTCTGGCCGCC
AAAGGCGTGGGCGCGGACATCGTCGCGCCGCTGCTGCCCGGCCGCAATGAAGAACTGGCCGCCGCCGTCGGCGTTTTGGA
AAAAAAATTCGCCGCACCGGCGGACAATCCGGCGAACAAACTCAAACAGATGCGCTTTCTCGCCTACCGAGGTTTCGATG
CCGACACCGTCCGCCGCGCCCTGAAAACGGCCTGGCAGGAAGACGAAACGGAAAACGGCTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(29-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

66.216

96.732

0.641