Detailed information NTG0938875

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACEWPO_RS21245
• Genome accession: NZ_CP169294
• Coordinates: 4358638..4359663 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain MG1655-pvir
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4353638..4364663

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACEWPO_RS21225 (ACEWPO_21225)	metJ	4354699..4355016 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ACEWPO_RS21230 (ACEWPO_21230)	yiiX	4355200..4355808 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
ACEWPO_RS21235 (ACEWPO_21235)	rpmE	4355869..4356081 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACEWPO_RS21240 (ACEWPO_21240)	priA	4356284..4358482 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
ACEWPO_RS21245 (ACEWPO_21245)	cytR	4358638..4359663 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACEWPO_RS21250 (ACEWPO_21250)	ftsN	4359755..4360714 (+)	960	WP_000068828.1	cell division protein FtsN	-
ACEWPO_RS21255 (ACEWPO_21255)	hslV	4360807..4361337 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACEWPO_RS21260 (ACEWPO_21260)	hslU	4361347..4362678 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ACEWPO_RS21265 (ACEWPO_21265)	menA	4362745..4363671 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACEWPO_RS21270 (ACEWPO_21270)	rraA	4363764..4364249 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACEWPO_RS21275 (ACEWPO_21275)	zapB	4364334..4364579 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=938875 ACEWPO_RS21245 WP_000644904.1 4358638..4359663(+) (cytR) [Escherichia coli strain MG1655-pvir]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=938875 ACEWPO_RS21245 WP_000644904.1 4358638..4359663(+) (cytR) [Escherichia coli strain MG1655-pvir]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628