Detailed information
Bioinformatically predicted
Overview
| Name | rcrQ | Type | Regulator |
| Locus tag | LBA42_RS08720 | Genome accession | NZ_CP145437 |
| Coordinates | 1716925..1717908 (+) | Length | 327 a.a. |
| NCBI ID | WP_223840522.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain HAC 39-1996 | ||
| Function | regulate competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1711925..1722908
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LBA42_RS08695 (LBA42_08695) | - | 1712006..1712416 (+) | 411 | WP_000595757.1 | hypothetical protein | - |
| LBA42_RS08700 (LBA42_08700) | ply | 1712427..1713842 (+) | 1416 | WP_001284363.1 | cholesterol-dependent cytolysin pneumolysin | - |
| LBA42_RS08705 (LBA42_08705) | - | 1714723..1715439 (+) | 717 | WP_000532876.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| LBA42_RS08710 (LBA42_08710) | - | 1715563..1716033 (+) | 471 | WP_000517879.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| LBA42_RS08715 (LBA42_08715) | rcrP | 1716049..1716870 (+) | 822 | WP_000601682.1 | ABC transporter permease | Regulator |
| LBA42_RS08720 (LBA42_08720) | rcrQ | 1716925..1717908 (+) | 984 | WP_223840522.1 | ATP-binding cassette domain-containing protein | Regulator |
| LBA42_RS08725 (LBA42_08725) | - | 1717974..1718336 (+) | 363 | WP_000078805.1 | DUF2200 domain-containing protein | - |
| LBA42_RS08730 (LBA42_08730) | - | 1718333..1718836 (+) | 504 | WP_000800942.1 | phosphatase PAP2 family protein | - |
| LBA42_RS08735 (LBA42_08735) | - | 1718950..1719396 (+) | 447 | WP_000776589.1 | LytTR family DNA-binding domain-containing protein | - |
| LBA42_RS08740 (LBA42_08740) | - | 1719402..1720076 (+) | 675 | WP_000725750.1 | membrane protein | - |
| LBA42_RS08745 (LBA42_08745) | - | 1720237..1720428 (+) | 192 | WP_000291826.1 | cell wall-binding protein | - |
| LBA42_RS08750 (LBA42_08750) | - | 1720435..1720515 (+) | 81 | WP_223842529.1 | hypothetical protein | - |
| LBA42_RS08755 (LBA42_08755) | - | 1720713..1721012 (+) | 300 | WP_001013974.1 | DUF4651 domain-containing protein | - |
| LBA42_RS08760 (LBA42_08760) | - | 1721009..1721326 (+) | 318 | WP_000615769.1 | thioredoxin family protein | - |
| LBA42_RS08765 (LBA42_08765) | ytpR | 1721342..1721968 (+) | 627 | WP_000578289.1 | YtpR family tRNA-binding protein | - |
| LBA42_RS08770 (LBA42_08770) | - | 1722010..1722771 (+) | 762 | WP_001107758.1 | SDR family NAD(P)-dependent oxidoreductase | - |
Sequence
Protein
Download Length: 327 a.a. Molecular weight: 36156.86 Da Isoelectric Point: 4.4298
>NTDB_id=938734 LBA42_RS08720 WP_223840522.1 1716925..1717908(+) (rcrQ) [Streptococcus pneumoniae strain HAC 39-1996]
MVSAKRINQVLDLHSSIQNPVQVQLTDENFKGQVEFKDVTFRYAANSEAVIEHVSFKAETGQTVAFIGSTGSGKSTLVNL
IPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGTGKTTIVNLLMKFYEIDKGSIHIDGVDTKAMTRSEVHDA
FSMVLQDTWLFEGTIRDNLIYNQIGISDERMMEASKAVGIHHFIMTLPDGYDTILDDTVTLSVGQKQLLTIARALLKDAP
LLILDEATSSVDTRTEELIQKAMDRLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQGNYEELMAQGGFYADLYNSQF
TEDEAEE
MVSAKRINQVLDLHSSIQNPVQVQLTDENFKGQVEFKDVTFRYAANSEAVIEHVSFKAETGQTVAFIGSTGSGKSTLVNL
IPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGTGKTTIVNLLMKFYEIDKGSIHIDGVDTKAMTRSEVHDA
FSMVLQDTWLFEGTIRDNLIYNQIGISDERMMEASKAVGIHHFIMTLPDGYDTILDDTVTLSVGQKQLLTIARALLKDAP
LLILDEATSSVDTRTEELIQKAMDRLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQGNYEELMAQGGFYADLYNSQF
TEDEAEE
Nucleotide
Download Length: 984 bp
>NTDB_id=938734 LBA42_RS08720 WP_223840522.1 1716925..1717908(+) (rcrQ) [Streptococcus pneumoniae strain HAC 39-1996]
ATGGTCTCTGCTAAGCGGATTAATCAAGTTTTAGATTTGCATTCTTCTATCCAAAACCCTGTTCAAGTACAGCTGACTGA
TGAAAACTTCAAAGGTCAGGTCGAGTTTAAGGATGTGACCTTCCGCTATGCGGCAAATTCGGAGGCAGTTATTGAACATG
TTAGCTTTAAAGCAGAAACTGGTCAAACAGTGGCCTTTATTGGGTCAACAGGTTCTGGTAAATCAACTCTGGTCAATCTG
ATTCCACGTTTCTACGACGTGTCAGCAGGAGAAATTCTGGTGGACGGTGTCAATGTTCAAGACTATGACTTCTCTGCGAC
AGCTCATGCTGGTCAAAAGGTTGCCATTGTTGGGCCGACTGGGACTGGTAAGACAACCATTGTCAATCTTTTGATGAAAT
TCTATGAGATTGATAAGGGAAGTATTCACATTGATGGTGTGGATACCAAGGCTATGACGCGTTCAGAAGTGCATGATGCC
TTTTCAATGGTCTTGCAGGATACCTGGCTCTTTGAAGGAACTATTCGAGACAATCTCATCTATAATCAAATAGGGATTAG
TGATGAACGAATGATGGAAGCTAGTAAGGCTGTGGGAATTCACCACTTTATTATGACCTTGCCAGATGGCTATGATACCA
TCTTGGATGACACCGTGACCTTGTCTGTAGGACAAAAACAACTATTGACTATTGCTCGTGCCCTTCTTAAGGATGCACCG
CTTTTGATTTTGGATGAGGCGACTTCTTCTGTTGACACACGGACAGAGGAATTGATCCAAAAAGCCATGGACCGTTTGAT
GGAAGGACGCACATCCTTTGTCATTGCCCACCGCTTGTCAACCATCCGAAATGCAGACTTGATCTTGGTCATGAAAGATG
GAAATATCATCGAGCAAGGCAACTATGAGGAACTGATGGCGCAAGGTGGCTTCTACGCTGACTTGTACAATAGTCAATTT
ACAGAAGATGAAGCAGAAGAATAA
ATGGTCTCTGCTAAGCGGATTAATCAAGTTTTAGATTTGCATTCTTCTATCCAAAACCCTGTTCAAGTACAGCTGACTGA
TGAAAACTTCAAAGGTCAGGTCGAGTTTAAGGATGTGACCTTCCGCTATGCGGCAAATTCGGAGGCAGTTATTGAACATG
TTAGCTTTAAAGCAGAAACTGGTCAAACAGTGGCCTTTATTGGGTCAACAGGTTCTGGTAAATCAACTCTGGTCAATCTG
ATTCCACGTTTCTACGACGTGTCAGCAGGAGAAATTCTGGTGGACGGTGTCAATGTTCAAGACTATGACTTCTCTGCGAC
AGCTCATGCTGGTCAAAAGGTTGCCATTGTTGGGCCGACTGGGACTGGTAAGACAACCATTGTCAATCTTTTGATGAAAT
TCTATGAGATTGATAAGGGAAGTATTCACATTGATGGTGTGGATACCAAGGCTATGACGCGTTCAGAAGTGCATGATGCC
TTTTCAATGGTCTTGCAGGATACCTGGCTCTTTGAAGGAACTATTCGAGACAATCTCATCTATAATCAAATAGGGATTAG
TGATGAACGAATGATGGAAGCTAGTAAGGCTGTGGGAATTCACCACTTTATTATGACCTTGCCAGATGGCTATGATACCA
TCTTGGATGACACCGTGACCTTGTCTGTAGGACAAAAACAACTATTGACTATTGCTCGTGCCCTTCTTAAGGATGCACCG
CTTTTGATTTTGGATGAGGCGACTTCTTCTGTTGACACACGGACAGAGGAATTGATCCAAAAAGCCATGGACCGTTTGAT
GGAAGGACGCACATCCTTTGTCATTGCCCACCGCTTGTCAACCATCCGAAATGCAGACTTGATCTTGGTCATGAAAGATG
GAAATATCATCGAGCAAGGCAACTATGAGGAACTGATGGCGCAAGGTGGCTTCTACGCTGACTTGTACAATAGTCAATTT
ACAGAAGATGAAGCAGAAGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rcrQ | Streptococcus mutans UA159 |
80.804 |
68.502 |
0.554 |