Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | OO714_RS01600 | Genome accession | NZ_AP025740 |
| Coordinates | 349387..349869 (+) | Length | 160 a.a. |
| NCBI ID | WP_001046417.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain ATCC 19606 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 344387..354869
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO714_RS01590 (KAMO5_03200) | pilX | 344690..345508 (+) | 819 | WP_000149377.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| OO714_RS01595 (KAMO5_03210) | pilY1 | 345520..349374 (+) | 3855 | WP_000768965.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| OO714_RS01600 (KAMO5_03220) | pilY2 | 349387..349869 (+) | 483 | WP_001046417.1 | type IV pilin protein | Machinery gene |
| OO714_RS01605 (KAMO5_03230) | pilE | 349866..350291 (+) | 426 | WP_000788344.1 | type IV pilin protein | Machinery gene |
| OO714_RS01610 (KAMO5_03240) | rpsP | 350438..350689 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| OO714_RS01615 (KAMO5_03250) | rimM | 350709..351257 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| OO714_RS01620 (KAMO5_03260) | trmD | 351303..352043 (+) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| OO714_RS01625 (KAMO5_03270) | rplS | 352252..352620 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| OO714_RS01630 (KAMO5_03280) | - | 352673..353614 (-) | 942 | WP_085916958.1 | triacylglycerol lipase | - |
| OO714_RS01635 (KAMO5_03290) | - | 353729..354760 (-) | 1032 | WP_001189454.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17516.77 Da Isoelectric Point: 8.4817
>NTDB_id=93863 OO714_RS01600 WP_001046417.1 349387..349869(+) (pilY2) [Acinetobacter baumannii strain ATCC 19606]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=93863 OO714_RS01600 WP_001046417.1 349387..349869(+) (pilY2) [Acinetobacter baumannii strain ATCC 19606]
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTGGAACAGCATAAATCAAGAAATTTTACTTATAGGGGGTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGACAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTGGAACAGCATAAATCAAGAAATTTTACTTATAGGGGGTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGACAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
98.125 |
100 |
0.981 |
| comE | Acinetobacter baylyi ADP1 |
41.279 |
100 |
0.444 |