Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | OO714_RS01575 | Genome accession | NZ_AP025740 |
| Coordinates | 342664..343137 (+) | Length | 157 a.a. |
| NCBI ID | WP_001214059.1 | Uniprot ID | A0A009PK04 |
| Organism | Acinetobacter baumannii strain ATCC 19606 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 337664..348137
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO714_RS01550 (KAMO5_03130) | - | 338127..340232 (-) | 2106 | WP_001117590.1 | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | - |
| OO714_RS01555 | - | 340272..340402 (-) | 131 | Protein_296 | hypothetical protein | - |
| OO714_RS01560 (KAMO5_03140) | rpoZ | 340441..340719 (-) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| OO714_RS01565 (KAMO5_03150) | gmk | 340792..341421 (-) | 630 | WP_000015937.1 | guanylate kinase | - |
| OO714_RS01570 (KAMO5_03160) | ispH | 341544..342494 (+) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| OO714_RS01575 (KAMO5_03170) | fimU | 342664..343137 (+) | 474 | WP_001214059.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| OO714_RS01580 (KAMO5_03180) | pilV | 343131..343691 (+) | 561 | WP_002194578.1 | type IV pilus modification protein PilV | Machinery gene |
| OO714_RS01585 (KAMO5_03190) | pilW | 343692..344693 (+) | 1002 | WP_000079195.1 | PilW family protein | Machinery gene |
| OO714_RS01590 (KAMO5_03200) | pilX | 344690..345508 (+) | 819 | WP_000149377.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16837.47 Da Isoelectric Point: 9.3085
>NTDB_id=93858 OO714_RS01575 WP_001214059.1 342664..343137(+) (fimU) [Acinetobacter baumannii strain ATCC 19606]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWKTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWKTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=93858 OO714_RS01575 WP_001214059.1 342664..343137(+) (fimU) [Acinetobacter baumannii strain ATCC 19606]
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCAGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGTCGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGAAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAATGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCAGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGTCGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGAAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAATGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
99.363 |
100 |
0.994 |