Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | OO714_RS01520 | Genome accession | NZ_AP025740 |
| Coordinates | 332938..333366 (+) | Length | 142 a.a. |
| NCBI ID | WP_000993713.1 | Uniprot ID | A0A6F8TC45 |
| Organism | Acinetobacter baumannii strain ATCC 19606 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 327938..338366
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO714_RS01500 (KAMO5_03030) | - | 329326..330213 (+) | 888 | WP_001017317.1 | metal-dependent hydrolase | - |
| OO714_RS01505 (KAMO5_03040) | - | 330344..330934 (+) | 591 | WP_000846931.1 | LemA family protein | - |
| OO714_RS01510 (KAMO5_03050) | - | 330959..332041 (+) | 1083 | WP_001246543.1 | YgcG family protein | - |
| OO714_RS01515 (KAMO5_03060) | - | 332035..332595 (+) | 561 | WP_000258949.1 | TPM domain-containing protein | - |
| OO714_RS01520 (KAMO5_03070) | pilA | 332938..333366 (+) | 429 | WP_000993713.1 | pilin | Machinery gene |
| OO714_RS01525 (KAMO5_03080) | - | 333422..334732 (+) | 1311 | WP_000913740.1 | O-antigen ligase | - |
| OO714_RS01530 (KAMO5_03090) | - | 334839..336467 (+) | 1629 | WP_001195770.1 | PglL family O-oligosaccharyltransferase | - |
| OO714_RS01535 (KAMO5_03100) | bfr | 336510..336974 (-) | 465 | WP_000678117.1 | bacterioferritin | - |
| OO714_RS01540 (KAMO5_03110) | - | 337219..337413 (-) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
| OO714_RS01545 (KAMO5_03120) | - | 337623..338006 (-) | 384 | WP_000090000.1 | RidA family protein | - |
Sequence
Protein
Download Length: 142 a.a. Molecular weight: 14515.55 Da Isoelectric Point: 6.1941
>NTDB_id=93857 OO714_RS01520 WP_000993713.1 332938..333366(+) (pilA) [Acinetobacter baumannii strain ATCC 19606]
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYIAKSQASEAFTLADGLKTTINTNLQAGTCFAGGATAATAADQVAGKY
GDAEIGGTAPNCTITYTFKSSGVSTKLTSKQIVMNVSETGILTKNSSTNAPAELLPQSFTAS
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYIAKSQASEAFTLADGLKTTINTNLQAGTCFAGGATAATAADQVAGKY
GDAEIGGTAPNCTITYTFKSSGVSTKLTSKQIVMNVSETGILTKNSSTNAPAELLPQSFTAS
Nucleotide
Download Length: 429 bp
>NTDB_id=93857 OO714_RS01520 WP_000993713.1 332938..333366(+) (pilA) [Acinetobacter baumannii strain ATCC 19606]
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTTATGATCGTGGTTGCCATTATCGGTATTTTGGCGGCAATTGCGAT
TCCTGCGTATCAAAACTATATTGCTAAGTCACAAGCATCTGAGGCATTTACTCTAGCAGATGGATTGAAAACAACAATTA
ATACTAATTTACAGGCTGGGACATGTTTTGCTGGCGGCGCTACTGCAGCAACGGCCGCTGATCAAGTAGCTGGAAAATAT
GGTGATGCTGAGATTGGCGGAACTGCACCAAATTGTACGATCACCTATACATTCAAATCATCGGGTGTATCAACTAAACT
TACTTCTAAACAGATTGTAATGAATGTAAGCGAAACAGGTATTTTAACAAAGAATAGCAGTACTAATGCTCCAGCTGAGT
TACTTCCACAATCTTTTACAGCTTCATAA
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTTATGATCGTGGTTGCCATTATCGGTATTTTGGCGGCAATTGCGAT
TCCTGCGTATCAAAACTATATTGCTAAGTCACAAGCATCTGAGGCATTTACTCTAGCAGATGGATTGAAAACAACAATTA
ATACTAATTTACAGGCTGGGACATGTTTTGCTGGCGGCGCTACTGCAGCAACGGCCGCTGATCAAGTAGCTGGAAAATAT
GGTGATGCTGAGATTGGCGGAACTGCACCAAATTGTACGATCACCTATACATTCAAATCATCGGGTGTATCAACTAAACT
TACTTCTAAACAGATTGTAATGAATGTAAGCGAAACAGGTATTTTAACAAAGAATAGCAGTACTAATGCTCCAGCTGAGT
TACTTCCACAATCTTTTACAGCTTCATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter nosocomialis M2 |
92.254 |
100 |
0.923 |
| pilA | Acinetobacter baumannii strain A118 |
44.828 |
100 |
0.458 |
| pilA | Pseudomonas aeruginosa PAK |
41.497 |
100 |
0.43 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
40.411 |
100 |
0.415 |
| pilA | Vibrio cholerae strain A1552 |
40.411 |
100 |
0.415 |
| pilA | Vibrio cholerae C6706 |
40.411 |
100 |
0.415 |