Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | R9A00_RS03105 | Genome accession | NZ_AP028376 |
| Coordinates | 603327..603710 (+) | Length | 127 a.a. |
| NCBI ID | WP_002852281.1 | Uniprot ID | Q9PHN2 |
| Organism | Campylobacter jejuni strain BCH-10927 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 598327..608710
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R9A00_RS03085 (B10927_06120) | - | 598406..600340 (-) | 1935 | WP_002884143.1 | RNB domain-containing ribonuclease | - |
| R9A00_RS03090 (B10927_06130) | ilvC | 600459..601481 (+) | 1023 | WP_002858483.1 | ketol-acid reductoisomerase | - |
| R9A00_RS03095 (B10927_06140) | - | 601485..602567 (+) | 1083 | WP_317729468.1 | divergent polysaccharide deacetylase family protein | - |
| R9A00_RS03100 (B10927_06150) | dprA | 602557..603330 (+) | 774 | WP_002875504.1 | DNA-processing protein DprA | Machinery gene |
| R9A00_RS03105 (B10927_06160) | dprB | 603327..603710 (+) | 384 | WP_002852281.1 | Holliday junction resolvase RuvX | Machinery gene |
| R9A00_RS03110 (B10927_06170) | - | 603739..604578 (+) | 840 | WP_002866496.1 | RsmB/NOP family class I SAM-dependent RNA methyltransferase | - |
| R9A00_RS03115 (B10927_06180) | msrA | 604754..605251 (-) | 498 | WP_002875505.1 | peptide-methionine (S)-S-oxide reductase MsrA | - |
| R9A00_RS03120 (B10927_06190) | ppa | 605293..605811 (-) | 519 | WP_002867724.1 | inorganic diphosphatase | - |
| R9A00_RS03125 (B10927_06200) | adk | 605821..606399 (-) | 579 | WP_002859580.1 | adenylate kinase | - |
| R9A00_RS03130 (B10927_06210) | aspS | 606396..608147 (-) | 1752 | WP_317729469.1 | aspartate--tRNA ligase | - |
Sequence
Protein
Download Length: 127 a.a. Molecular weight: 14088.59 Da Isoelectric Point: 9.5433
>NTDB_id=93855 R9A00_RS03105 WP_002852281.1 603327..603710(+) (dprB) [Campylobacter jejuni strain BCH-10927]
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
Nucleotide
Download Length: 384 bp
>NTDB_id=93855 R9A00_RS03105 WP_002852281.1 603327..603710(+) (dprB) [Campylobacter jejuni strain BCH-10927]
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAAATTTCTTTAC
TCATTGTAGGCATTCCTAAGGGCGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCTTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAAATTTCTTTAC
TCATTGTAGGCATTCCTAAGGGCGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCTTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
44.882 |
100 |
0.449 |